Miyakogusa Predicted Gene
- Lj2g3v3188410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3188410.1 Non Chatacterized Hit- tr|I3SWY8|I3SWY8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.41,0,Rcd1,Cell
differentiation, Rcd1-like; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Cell differentiation,CUFF.39850.1
(945 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65798 similar to UniRef100_A7P0L4 Cluster: Chromosome... 1126 0.0
gnl|LJGI|TC59757 homologue to UniRef100_A7P0L4 Cluster: Chromoso... 391 e-108
gnl|LJGI|BP050970 similar to UniRef100_Q802Y4 Cluster: Zgc:55733... 339 2e-92
>gnl|LJGI|TC65798 similar to UniRef100_A7P0L4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 737
Score = 1126 bits (568), Expect = 0.0
Identities = 575/576 (99%), Gaps = 1/576 (0%)
Strand = Plus / Plus
Query: 1 atggccaatttgccccaatcgctctcaatcaccgcctccacctcctctcagccgcgcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 atggccaatttgccccaatcgctctcaatcaccgcctccacctcctctcagccgcgcaac 215
Query: 61 accgccgtcaaggatcgtgagacggtggcaacggaacgcattgtcgttcaactgattctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 accgccgtcaaggatcgtgagacggtggcaacggaacgcattgtcgttcaactgattctc 275
Query: 121 gaactcagcaaccccgatcatcgtgaaaacgctcttcatgaactctccaagaagagggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gaactcagcaaccccgatcatcgtgaaaacgctcttcatgaactctccaagaagagggaa 335
Query: 181 gtggttcaggatctcgctccgctaatttggaattcttttggtaccattgccgcacttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtggttcaggatctcgctccgctaatttggaattcttttggtaccattgccgcacttttg 395
Query: 241 caggaaataacttcagtataccctgttatttcaccaccaactctttctccagcacaatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 caggaaataacttcagtataccctgttatttcaccaccaactctttctccagcacaatca 455
Query: 301 aatcgagtgtgcaatgcacttgctctacttcagtatgtggcatctcaccgtgatacaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aatcgagtgtgcaatgcacttgctctacttcagtatgtggcatctcaccgtgatacaagg 515
Query: 361 ttgctattcctcaatgctcacttacatctatatctgtatcccttccttaagacaacaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ttgctattcctcaatgctcacttacatctatatctgtatcccttccttaagacaacaagc 575
Query: 421 aaggcaaagccatttgagtatttgcggcttaccagtcttggtgtcattggtgccttggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aaggcaaagccatttgagtatttgcggcttaccagtcttggtgtcattggtgccttggtg 635
Query: 481 aaggttgaagacgtggaaattataagtttccttctttcaacggagataattcctctctgc 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aa-gttgaagacgtggaaattataagtttccttctttcaacggagataattcctctctgc 694
Query: 541 ctgcacaccatggaaatcggcactgtgttgtcaaaa 576
||||||||||||||||||||||||||||||||||||
Sbjct: 695 ctgcacaccatggaaatcggcactgtgttgtcaaaa 730
>gnl|LJGI|TC59757 homologue to UniRef100_A7P0L4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 1233
Score = 391 bits (197), Expect = e-108
Identities = 404/473 (85%)
Strand = Plus / Plus
Query: 121 gaactcagcaaccccgatcatcgtgaaaacgctcttcatgaactctccaagaagagggaa 180
|||||||||||||| |||| |||||||| ||||||| |||||||||||||| |||||
Sbjct: 206 gaactcagcaaccctgatctccgtgaaaatgctcttctcgaactctccaagaaaagggag 265
Query: 181 gtggttcaggatctcgctccgctaatttggaattcttttggtaccattgccgcacttttg 240
|| |||| ||||| ||||| | | |||||||||||||| || ||||| |||||||||
Sbjct: 266 ctgtttcaagatcttgctccattgttatggaattcttttgggactattgctgcacttttg 325
Query: 241 caggaaataacttcagtataccctgttatttcaccaccaactctttctccagcacaatca 300
||||||||| ||| |||||||||| |||||||||| |||||| ||||||| ||||||
Sbjct: 326 caggaaatagtttctatataccctgtcctttcaccacccactcttactccagcgcaatca 385
Query: 301 aatcgagtgtgcaatgcacttgctctacttcagtatgtggcatctcaccgtgatacaagg 360
||||| ||||||||||| |||||||| ||||||| |||||| ||||||| ||||||||||
Sbjct: 386 aatcgggtgtgcaatgctcttgctcttcttcagtgtgtggcgtctcaccctgatacaagg 445
Query: 361 ttgctattcctcaatgctcacttacatctatatctgtatcccttccttaagacaacaagc 420
||| ||||||||||||||| | | ||| ||||||||||| |||||||| |||||||||
Sbjct: 446 atgcaattcctcaatgctcatatccctctgtatctgtatcctttccttaatacaacaagc 505
Query: 421 aaggcaaagccatttgagtatttgcggcttaccagtcttggtgtcattggtgccttggtg 480
||| ||| ||||||||||| || |||| ||||||||||||||||||||||| ||||||
Sbjct: 506 aagtcaagaccatttgagtacctgaggctcaccagtcttggtgtcattggtgcattggtg 565
Query: 481 aaggttgaagacgtggaaattataagtttccttctttcaacggagataattcctctctgc 540
|||||||| || ||| | |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 566 aaggttgatgatacggaggtcataagttttcttctttcaactgagataattcctctttgc 625
Query: 541 ctgcacaccatggaaatcggcactgtgttgtcaaaaacagtttcaacatttat 593
|||| |||||||||||| |||| || |||||||||||||| ||||||||||
Sbjct: 626 ctgcgcaccatggaaatgggcagtgaactgtcaaaaacagttgcaacatttat 678
>gnl|LJGI|BP050970 similar to UniRef100_Q802Y4 Cluster: Zgc:55733; n=2; Danio
rerio|Rep: Zgc:55733 - Danio rerio (Zebrafish)
(Brachydanio rerio), partial (6%)
Length = 479
Score = 339 bits (171), Expect = 2e-92
Identities = 171/171 (100%)
Strand = Plus / Plus
Query: 1 atggccaatttgccccaatcgctctcaatcaccgcctccacctcctctcagccgcgcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atggccaatttgccccaatcgctctcaatcaccgcctccacctcctctcagccgcgcaac 172
Query: 61 accgccgtcaaggatcgtgagacggtggcaacggaacgcattgtcgttcaactgattctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 accgccgtcaaggatcgtgagacggtggcaacggaacgcattgtcgttcaactgattctc 232
Query: 121 gaactcagcaaccccgatcatcgtgaaaacgctcttcatgaactctccaag 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gaactcagcaaccccgatcatcgtgaaaacgctcttcatgaactctccaag 283