Miyakogusa Predicted Gene
- Lj2g3v3188370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3188370.1 Non Chatacterized Hit- tr|J3L0R3|J3L0R3_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G2,37.97,5e-16,DUF761,Protein of unknown function DUF761,
plant; DUF4408,Domain of unknown function DUF4408; seg,NU,CUFF.39848.1
(565 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62319 similar to UniRef100_A7P0L2 Cluster: Chromosome... 1078 0.0
gnl|LJGI|FS352119 similar to UniRef100_A7P0L2 Cluster: Chromosom... 250 8e-66
gnl|LJGI|TC80099 similar to UniRef100_A7P0L2 Cluster: Chromosome... 123 1e-27
>gnl|LJGI|TC62319 similar to UniRef100_A7P0L2 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 765
Score = 1078 bits (544), Expect = 0.0
Identities = 558/565 (98%)
Strand = Plus / Plus
Query: 1 atgaataacaaagttgataaatctcaagttctagtgctctttgtcctagctcttctcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 atgaataacaaagttgataaatctcaagttctagtgctctttgtcctagctcttctcctt 154
Query: 61 gttatcacacccttcttaccttcctctctgaaacctacctacctttacttcatcttgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gttatcacacccttcttaccttcctctctgaaacctacctacctttacttcatcttgaac 214
Query: 121 atcctcatcatttcacttggagctgaagctggccttctttcagctttttctaagcccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atcctcatcatttcacttggagctgaagctggccttctttcagctttttctaagcccttt 274
Query: 181 gaagacagaaagcaacatgtttcccctgttttccctgtttcccagaagccagacatgccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gaagacagaaagcaacatgtttcccctgttttccctgtttcccagaagccagacatgccc 334
Query: 241 tcagaaatcatccctgaggaaagtggaagtgctgcctcagaacatggtgaaaagaagcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcagaaatcatccctgaggaaagtggaagtgctgcctcagaacatggtgaaaagaagcct 394
Query: 301 aaaaatgttgaaaatttttcatccgagaagattcttcgtgtcattaaagtatataagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaaaatgttgaaaatttttcatccgagaagattcttcgtgtcattaaagtatataagatg 454
Query: 361 aaaaagtgtgcttcaatgccaagccnnnnnnncataggaggtggagaggctgacacagaa 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 455 aaaaagtgtgcttcaatgccaagcctttttttcataggaggtggagaggctgacacagaa 514
Query: 421 gtcatggatgaggagcctgaagcagaagatgaggttggaggagttaatgcgcaagagctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gtcatggatgaggagcctgaagcagaagatgaggttggaggagttaatgcgcaagagctg 574
Query: 481 tttgcaaaagctgaggccttcattgggaacttctacaagcagctaaagatgcagagagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tttgcaaaagctgaggccttcattgggaacttctacaagcagctaaagatgcagagagag 634
Query: 541 gagcacatgatctatcagaattaga 565
|||||||||||||||||||||||||
Sbjct: 635 gagcacatgatctatcagaattaga 659
>gnl|LJGI|FS352119 similar to UniRef100_A7P0L2 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 360
Score = 250 bits (126), Expect = 8e-66
Identities = 126/126 (100%)
Strand = Plus / Minus
Query: 440 aagcagaagatgaggttggaggagttaatgcgcaagagctgtttgcaaaagctgaggcct 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aagcagaagatgaggttggaggagttaatgcgcaagagctgtttgcaaaagctgaggcct 301
Query: 500 tcattgggaacttctacaagcagctaaagatgcagagagaggagcacatgatctatcaga 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcattgggaacttctacaagcagctaaagatgcagagagaggagcacatgatctatcaga 241
Query: 560 attaga 565
||||||
Sbjct: 240 attaga 235
>gnl|LJGI|TC80099 similar to UniRef100_A7P0L2 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 906
Score = 123 bits (62), Expect = 1e-27
Identities = 130/152 (85%), Gaps = 3/152 (1%)
Strand = Plus / Plus
Query: 19 aaatctcaagttctagtgctctttgtcctagctcttctccttgttatcacacccttctta 78
||||||||||||||||| |||||||| |||| |||||| ||||||||||||||| |||
Sbjct: 46 aaatctcaagttctagtactctttgttctagttcttct---tgttatcacacccttttta 102
Query: 79 ccttcctctctgaaacctacctacctttacttcatcttgaacatcctcatcatttcactt 138
|||||||| || | ||||||| | | ||||||||||||||| || ||||||| ||||
Sbjct: 103 ccttcctccctaaggcctaccttcttgtacttcatcttgaacttcaccatcattgcactg 162
Query: 139 ggagctgaagctggccttctttcagctttttc 170
|| |||||||||||||| ||||||| ||||||
Sbjct: 163 ggtgctgaagctggcctcctttcagttttttc 194
Score = 107 bits (54), Expect = 7e-23
Identities = 90/102 (88%)
Strand = Plus / Plus
Query: 442 gcagaagatgaggttggaggagttaatgcgcaagagctgtttgcaaaagctgaggccttc 501
|||||||| ||| |||| |||||| | ||||||| |||||||||||||||||||||||
Sbjct: 601 gcagaagaggagattgggggagttttggggcaagagttgtttgcaaaagctgaggccttc 660
Query: 502 attgggaacttctacaagcagctaaagatgcagagagaggag 543
||||||||||||||||| || | ||||||||||||||||||
Sbjct: 661 attgggaacttctacaaacaattgaagatgcagagagaggag 702