Miyakogusa Predicted Gene
- Lj2g3v3184270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3184270.1 Non Chatacterized Hit- tr|I1JJB4|I1JJB4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.05,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,Rab3 GTPase-activating
protein catalytic subuni,CUFF.39841.1
(1815 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP037804 similar to UniRef100_A7P0N2 Cluster: Chromosom... 1082 0.0
gnl|LJGI|TC62587 weakly similar to UniRef100_A7P0N2 Cluster: Chr... 515 e-145
gnl|LJGI|FS325263 similar to UniRef100_A7P0N2 Cluster: Chromosom... 424 e-118
>gnl|LJGI|BP037804 similar to UniRef100_A7P0N2 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 546
Score = 1082 bits (546), Expect = 0.0
Identities = 546/546 (100%)
Strand = Plus / Plus
Query: 1025 tgatgatgcaagctagttcgaacataaaagagccaaccaataatgatggtgaagctcctg 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatgatgcaagctagttcgaacataaaagagccaaccaataatgatggtgaagctcctg 60
Query: 1085 caagccctgttctatatgctagattagataatggggagcttgttcttcgacttggtgctg 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagccctgttctatatgctagattagataatggggagcttgttcttcgacttggtgctg 120
Query: 1145 attgccctgctggagatctaacattgttggaaactggcgagcctgtgtactctcctctca 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgccctgctggagatctaacattgttggaaactggcgagcctgtgtactctcctctca 180
Query: 1205 cccaggaaggacctttgcttacagaagatctaattagagaaacagaggagtttgtgctgc 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccaggaaggacctttgcttacagaagatctaattagagaaacagaggagtttgtgctgc 240
Query: 1265 ggacagggagtgttggtgctgggtgctctcaactgctttcggacatgcaggctttcaagg 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggacagggagtgttggtgctgggtgctctcaactgctttcggacatgcaggctttcaagg 300
Query: 1325 ctgcaaatcctgggtgtattttggaggattttgtaagatggcactctcctcctgattgga 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgcaaatcctgggtgtattttggaggattttgtaagatggcactctcctcctgattgga 360
Query: 1385 cagataatgaggcaagcattgaggacagtgatgttttcgatagtggtgagtcattgtcta 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagataatgaggcaagcattgaggacagtgatgttttcgatagtggtgagtcattgtcta 420
Query: 1445 ccagaggtcagctaagtcgacgaatgcaaaaagaaggtaatttgtggcgtgaattgtggg 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccagaggtcagctaagtcgacgaatgcaaaaagaaggtaatttgtggcgtgaattgtggg 480
Query: 1505 aaacatctaaacccgtaccagccgttaagcaggcacctctcttcgatgaagatttggcag 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaacatctaaacccgtaccagccgttaagcaggcacctctcttcgatgaagatttggcag 540
Query: 1565 tggagg 1570
||||||
Sbjct: 541 tggagg 546
>gnl|LJGI|TC62587 weakly similar to UniRef100_A7P0N2 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 732
Score = 515 bits (260), Expect = e-145
Identities = 260/260 (100%)
Strand = Plus / Plus
Query: 1556 atttggcagtggagggcatcctcaatgcattagaggacatccatccttctgagctttacc 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttggcagtggagggcatcctcaatgcattagaggacatccatccttctgagctttacc 60
Query: 1616 gacaactgtttgtttctttacttggtttaggatttgcaattgctgaacccatgctatcta 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacaactgtttgtttctttacttggtttaggatttgcaattgctgaacccatgctatcta 120
Query: 1676 gcaacagtgacttctcaaaggtgttctatgactgcaaggagtacattgttgccacatgtc 1735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaacagtgacttctcaaaggtgttctatgactgcaaggagtacattgttgccacatgtc 180
Query: 1736 aaagcaacaaattgagtgagaaagttgatgaacttgtccaggtatatgaaacggtggaga 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagcaacaaattgagtgagaaagttgatgaacttgtccaggtatatgaaacggtggaga 240
Query: 1796 caatgttgctgaatcctgag 1815
||||||||||||||||||||
Sbjct: 241 caatgttgctgaatcctgag 260
>gnl|LJGI|FS325263 similar to UniRef100_A7P0N2 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 731
Score = 424 bits (214), Expect = e-118
Identities = 261/284 (91%)
Strand = Plus / Plus
Query: 1 atggattcgccgccaacctttgtatcgaaagcgaggacggccttcaattccgcagctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atggattcgccgccaacctttgtatcgaaagcgaggacggccttcaattccgcagctgcc 494
Query: 61 aaagcggagcgagttcttatggacttcaaatcagatcgagaacatgataaggaatcaccn 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aaagcggagcgagttcttatggacttcaaatcagatcgagaacatgataaggaatcaccc 554
Query: 121 nnnnnnnnnnnnnnnnnnnnnttcacgaagcaatcggaagctgaatctcctaacagcgaa 180
|||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aacaacaacaacaacaacaacttcacgaagcaatcggaagctgaatctcctaacagcgaa 614
Query: 181 aacgaatccaagctacgcggtgagtttaagcataaaaagtggaggcctccacatatagga 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aacgaatccaagctacacggtgagtttaagcataaaaagtggaggcctccacatatagga 674
Query: 241 ataaagcaagattggcaagatagatttaggaacattcggatagg 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ataaagcaagattggcaagatagatttaggaacattcggatagg 718