Miyakogusa Predicted Gene

Lj2g3v3164170.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3164170.1 tr|G7I4S9|G7I4S9_MEDTR Aconitate hydratase
OS=Medicago truncatula GN=MTR_1g075520 PE=4
SV=1,83.78,0,LeuD/IlvD-like,Aconitase/3-isopropylmalate dehydratase,
swivel; no description,Aconitase/3-isopropyl,CUFF.39826.1
         (445 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75359 homologue to UniRef100_P49608 Cluster: Aconitat...    90   1e-17

>gnl|LJGI|TC75359 homologue to UniRef100_P49608 Cluster: Aconitate hydratase,
           cytoplasmic; n=1; Cucurbita maxima|Rep: Aconitate
           hydratase, cytoplasmic - Cucurbita maxima (Pumpkin)
           (Winter squash), partial (28%)
          Length = 900

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 150/185 (81%)
 Strand = Plus / Plus

                                                                       
Query: 208 actgatcatatttctccccctggaagaatccacaaggatagccctgctgcagagtactta 267
           |||||||||||||||||  ||||||| || || |||||||| ||||||||  | ||| | 
Sbjct: 116 actgatcatatttctccagctggaagcattcagaaggatagtcctgctgctaaatacctc 175

                                                                       
Query: 268 cttgagcatggcgtggatcaccaggacttcaattcttatggtagtcggcgcggaaatgat 327
           || |||| ||| || || | | ||||||||||||||||||| ||||| || || ||||||
Sbjct: 176 ctagagcgtggggtagagcgcaaggacttcaattcttatggaagtcgtcgtggtaatgat 235

                                                                       
Query: 328 gaagtgatggtgagaggcacattttccagtatccgtcttgtgaacaaacttctgaatgga 387
           || |||||||  ||||| || ||| ||| ||| || ||||| ||||| || |||||||| 
Sbjct: 236 gaggtgatggcaagaggaacttttgccaatattcgccttgttaacaagctcctgaatggg 295

                
Query: 388 gaagt 392
           |||||
Sbjct: 296 gaagt 300