Miyakogusa Predicted Gene
- Lj2g3v3164090.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3164090.2 Non Chatacterized Hit- tr|I3SF96|I3SF96_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,100,0,SUI1,Translation initiation factor SUI1; EUKARYOTIC
TRANSLATION INITIATION FACTOR SUI1,NULL; no desc,CUFF.39822.2
(340 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS345320 similar to UniRef100_A7P0Q4 Cluster: Chromosom... 674 0.0
gnl|LJGI|TC66285 similar to UniRef100_A7P0Q4 Cluster: Chromosome... 674 0.0
gnl|LJGI|TC67552 similar to UniRef100_A7P0Q4 Cluster: Chromosome... 234 3e-61
gnl|LJGI|TC60977 101 3e-21
gnl|LJGI|FS337734 homologue to UniRef100_O48650 Cluster: Protein... 74 6e-13
gnl|LJGI|BI418765 homologue to UniRef100_O48650 Cluster: Protein... 74 6e-13
gnl|LJGI|TC63862 homologue to UniRef100_O48650 Cluster: Protein ... 74 6e-13
gnl|LJGI|GO021354 similar to UniRef100_A7PU77 Cluster: Chromosom... 64 6e-10
>gnl|LJGI|FS345320 similar to UniRef100_A7P0Q4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 709
Score = 674 bits (340), Expect = 0.0
Identities = 340/340 (100%)
Strand = Plus / Minus
Query: 1 atggttgatttggaaattcagattccaaacagatttgaccctttcgcggaggcaaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atggttgatttggaaattcagattccaaacagatttgaccctttcgcggaggcaaaagaa 560
Query: 61 tcagatgcgccgggggtgaaagagtatgtacatgtccgcatacagcagaggaatgggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tcagatgcgccgggggtgaaagagtatgtacatgtccgcatacagcagaggaatgggaag 500
Query: 121 aagagcttgaccacagtgcaggggctgaagaaggagttcagctatgagaagatcctcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagagcttgaccacagtgcaggggctgaagaaggagttcagctatgagaagatcctcaag 440
Query: 181 gacctcaagaaggagttctgctgcaacgggaacgtagtgcatgacaaggaactcggcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gacctcaagaaggagttctgctgcaacgggaacgtagtgcatgacaaggaactcggcaag 380
Query: 241 attatccagctccaaggtgatcagcgcaagaatgtttctcacttccttgttcaggctgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 attatccagctccaaggtgatcagcgcaagaatgtttctcacttccttgttcaggctgga 320
Query: 301 cttgttaagaaggaccgcatcaagattcatggtttctgac 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttgttaagaaggaccgcatcaagattcatggtttctgac 280
>gnl|LJGI|TC66285 similar to UniRef100_A7P0Q4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 649
Score = 674 bits (340), Expect = 0.0
Identities = 340/340 (100%)
Strand = Plus / Plus
Query: 1 atggttgatttggaaattcagattccaaacagatttgaccctttcgcggaggcaaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atggttgatttggaaattcagattccaaacagatttgaccctttcgcggaggcaaaagaa 115
Query: 61 tcagatgcgccgggggtgaaagagtatgtacatgtccgcatacagcagaggaatgggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tcagatgcgccgggggtgaaagagtatgtacatgtccgcatacagcagaggaatgggaag 175
Query: 121 aagagcttgaccacagtgcaggggctgaagaaggagttcagctatgagaagatcctcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 aagagcttgaccacagtgcaggggctgaagaaggagttcagctatgagaagatcctcaag 235
Query: 181 gacctcaagaaggagttctgctgcaacgggaacgtagtgcatgacaaggaactcggcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gacctcaagaaggagttctgctgcaacgggaacgtagtgcatgacaaggaactcggcaag 295
Query: 241 attatccagctccaaggtgatcagcgcaagaatgtttctcacttccttgttcaggctgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 attatccagctccaaggtgatcagcgcaagaatgtttctcacttccttgttcaggctgga 355
Query: 301 cttgttaagaaggaccgcatcaagattcatggtttctgac 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cttgttaagaaggaccgcatcaagattcatggtttctgac 395
>gnl|LJGI|TC67552 similar to UniRef100_A7P0Q4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 565
Score = 234 bits (118), Expect = 3e-61
Identities = 220/254 (86%)
Strand = Plus / Plus
Query: 82 gagtatgtacatgtccgcatacagcagaggaatgggaagaagagcttgaccacagtgcag 141
|||||||| ||| | ||||| ||||| |||||||| ||||| |||||||||||||||||
Sbjct: 170 gagtatgtgcatatacgcattcagcaaaggaatggaaagaaaagcttgaccacagtgcaa 229
Query: 142 gggctgaagaaggagttcagctatgagaagatcctcaaggacctcaagaaggagttctgc 201
||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||
Sbjct: 230 gggctgaagaaggagttcagctacgagaagatcctcaaggatcttaagaaggagttttgc 289
Query: 202 tgcaacgggaacgtagtgcatgacaaggaactcggcaagattatccagctccaaggtgat 261
||||||||||| || ||||| || ||||| || || ||||| || |||||||||||||||
Sbjct: 290 tgcaacgggaatgttgtgcaggataaggagctggggaagataattcagctccaaggtgat 349
Query: 262 cagcgcaagaatgtttctcacttccttgttcaggctggacttgttaagaaggaccgcatc 321
||||||||||| || ||||| || || ||||||||||| ||||| | ||| || | ||
Sbjct: 350 cagcgcaagaaggtgtctcagtttctggttcaggctggccttgtcaggaaagaacagatt 409
Query: 322 aagattcatggttt 335
||||||||||||||
Sbjct: 410 aagattcatggttt 423
>gnl|LJGI|TC60977
Length = 795
Score = 101 bits (51), Expect = 3e-21
Identities = 204/255 (80%)
Strand = Plus / Plus
Query: 85 tatgtacatgtccgcatacagcagaggaatgggaagaagagcttgaccacagtgcagggg 144
||||| ||| ||||| | |||||||||||||| | ||| ||| |||| || || |||||
Sbjct: 281 tatgtgcatatccgcgtgcagcagaggaatggcaggaaaagcctgacaactgttcaggga 340
Query: 145 ctgaagaaggagttcagctatgagaagatcctcaaggacctcaagaaggagttctgctgc 204
||||||| || ||||||||| | ||||| || |||||||| ||||| |||||||| |||
Sbjct: 341 ttgaagaaagaattcagctataacaagatactgaaggaccttaagaaagagttctgttgc 400
Query: 205 aacgggaacgtagtgcatgacaaggaactcggcaagattatccagctccaaggtgatcag 264
|| || | || || || ||| ||||| || || ||||||| || ||||||||||||
Sbjct: 401 aatggtacagttgttcaggacccagaacttggacaggttatccaacttcaaggtgatcag 460
Query: 265 cgcaagaatgtttctcacttccttgttcaggctggacttgttaagaaggaccgcatcaag 324
|| |||||||||||| |||||| || |||||||| | || |||||||| ||||||
Sbjct: 461 cggaagaatgtttctaccttcctagtccaggctggtatcgtgaagaaggataatatcaag 520
Query: 325 attcatggtttctga 339
|||||||||||||||
Sbjct: 521 attcatggtttctga 535
>gnl|LJGI|FS337734 homologue to UniRef100_O48650 Cluster: Protein translation factor
SUI1 homolog; n=1; Salix bakko|Rep: Protein translation
factor SUI1 homolog - Salix bakko (Japanese willow),
complete
Length = 702
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 146 tgaagaaggagttcagctatgagaagatcctcaaggacctcaagaaggagttctgctgca 205
|||||||||||||||||||| | ||||| || || ||||| |||||||||||||||||||
Sbjct: 215 tgaagaaggagttcagctataacaagattcttaaagaccttaagaaggagttctgctgca 274
Query: 206 a 206
|
Sbjct: 275 a 275
>gnl|LJGI|BI418765 homologue to UniRef100_O48650 Cluster: Protein translation factor
SUI1 homolog; n=1; Salix bakko|Rep: Protein translation
factor SUI1 homolog - Salix bakko (Japanese willow),
complete
Length = 544
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 146 tgaagaaggagttcagctatgagaagatcctcaaggacctcaagaaggagttctgctgca 205
|||||||||||||||||||| | ||||| || || ||||| |||||||||||||||||||
Sbjct: 291 tgaagaaggagttcagctataacaagattcttaaagaccttaagaaggagttctgctgca 350
Query: 206 a 206
|
Sbjct: 351 a 351
>gnl|LJGI|TC63862 homologue to UniRef100_O48650 Cluster: Protein translation factor
SUI1 homolog; n=1; Salix bakko|Rep: Protein translation
factor SUI1 homolog - Salix bakko (Japanese willow),
complete
Length = 731
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 146 tgaagaaggagttcagctatgagaagatcctcaaggacctcaagaaggagttctgctgca 205
|||||||||||||||||||| | ||||| || || ||||| |||||||||||||||||||
Sbjct: 354 tgaagaaggagttcagctataacaagattcttaaagaccttaagaaggagttctgctgca 413
Query: 206 a 206
|
Sbjct: 414 a 414
>gnl|LJGI|GO021354 similar to UniRef100_A7PU77 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 602
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 82 gagtatgtacatgtccgcatacagcagaggaatgggaagaagagcttgaccacagtgcag 141
|||||||| ||| | ||||| ||||| |||||||| ||||| |||||||||||||||||
Sbjct: 171 gagtatgtgcatatacgcattcagcaaaggaatggaaagaaaagcttgaccacagtgcaa 230
Query: 142 gggc 145
||||
Sbjct: 231 gggc 234