Miyakogusa Predicted Gene
- Lj2g3v3152930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3152930.1 Non Chatacterized Hit- tr|B9G712|B9G712_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,37.08,0.0001,seg,NULL; Peptide methionine sulfoxide
reductase,Peptide methionine sulphoxide reductase MsrA; no
de,CUFF.39798.1
(609 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63861 similar to UniRef100_A7PBQ8 Cluster: Chromosome... 1207 0.0
gnl|LJGI|BG662434 similar to UniRef100_A7PBQ8 Cluster: Chromosom... 680 0.0
gnl|LJGI|TC76804 similar to UniRef100_A7PBQ8 Cluster: Chromosome... 470 e-132
gnl|LJGI|TC63936 similar to UniRef100_Q6QPJ5 Cluster: Methionine... 64 1e-09
>gnl|LJGI|TC63861 similar to UniRef100_A7PBQ8 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1121
Score = 1207 bits (609), Expect = 0.0
Identities = 609/609 (100%)
Strand = Plus / Plus
Query: 1 atgaacctgctgagcagacttggtctcagtagcccaagggcaggagagaatatggattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atgaacctgctgagcagacttggtctcagtagcccaagggcaggagagaatatggattca 273
Query: 61 tccattgctcagggaccagacaacgacataccggcagccggtcaacagtttgcccagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tccattgctcagggaccagacaacgacataccggcagccggtcaacagtttgcccagttt 333
Query: 121 ggtgctggttgcttctggggtgttgagctggccttccagagggtatctggggtgaccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ggtgctggttgcttctggggtgttgagctggccttccagagggtatctggggtgaccaag 393
Query: 181 acagaggttggttatagccagggcctcttgcataatccaagatatgaggatgtctgctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 acagaggttggttatagccagggcctcttgcataatccaagatatgaggatgtctgctct 453
Query: 241 gggactacaaaccactcagaggttgtcagggtccagtatgatcctaaagactgtagctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gggactacaaaccactcagaggttgtcagggtccagtatgatcctaaagactgtagctat 513
Query: 301 gggtctctgcttgatgtgttctgggctagacacgatcctaccgcactgaaccggcagggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gggtctctgcttgatgtgttctgggctagacacgatcctaccgcactgaaccggcagggg 573
Query: 361 agtgatgtgggaactcaatacaggtctggaatatactattacacacctgagcaagagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 agtgatgtgggaactcaatacaggtctggaatatactattacacacctgagcaagagaaa 633
Query: 421 gaagcccaagaatctctggagcaacaacagaagaagttgaacaggaagattgtcacagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gaagcccaagaatctctggagcaacaacagaagaagttgaacaggaagattgtcacagag 693
Query: 481 attcttcctgccaagaagttctacagggcagaagaataccatcaacagtaccttgagaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 attcttcctgccaagaagttctacagggcagaagaataccatcaacagtaccttgagaaa 753
Query: 541 gggggtcgatttggttccaagcaatcttcttctaagggatgcaatgatccaattcgatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gggggtcgatttggttccaagcaatcttcttctaagggatgcaatgatccaattcgatgc 813
Query: 601 tatggttaa 609
|||||||||
Sbjct: 814 tatggttaa 822
>gnl|LJGI|BG662434 similar to UniRef100_A7PBQ8 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 393
Score = 680 bits (343), Expect = 0.0
Identities = 343/343 (100%)
Strand = Plus / Plus
Query: 17 gacttggtctcagtagcccaagggcaggagagaatatggattcatccattgctcagggac 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 gacttggtctcagtagcccaagggcaggagagaatatggattcatccattgctcagggac 110
Query: 77 cagacaacgacataccggcagccggtcaacagtttgcccagtttggtgctggttgcttct 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cagacaacgacataccggcagccggtcaacagtttgcccagtttggtgctggttgcttct 170
Query: 137 ggggtgttgagctggccttccagagggtatctggggtgaccaagacagaggttggttata 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ggggtgttgagctggccttccagagggtatctggggtgaccaagacagaggttggttata 230
Query: 197 gccagggcctcttgcataatccaagatatgaggatgtctgctctgggactacaaaccact 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gccagggcctcttgcataatccaagatatgaggatgtctgctctgggactacaaaccact 290
Query: 257 cagaggttgtcagggtccagtatgatcctaaagactgtagctatgggtctctgcttgatg 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cagaggttgtcagggtccagtatgatcctaaagactgtagctatgggtctctgcttgatg 350
Query: 317 tgttctgggctagacacgatcctaccgcactgaaccggcaggg 359
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgttctgggctagacacgatcctaccgcactgaaccggcaggg 393
>gnl|LJGI|TC76804 similar to UniRef100_A7PBQ8 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1267
Score = 470 bits (237), Expect = e-132
Identities = 516/609 (84%)
Strand = Plus / Plus
Query: 1 atgaacctgctgagcagacttggtctcagtagcccaagggcaggagagaatatggattca 60
||||||||| ||| ||||||||| | ||||| ||||| || ||||| |||||||||
Sbjct: 315 atgaacctgttgaacagacttggatttggtagcacaaggtcaccggagaacatggattca 374
Query: 61 tccattgctcagggaccagacaacgacataccggcagccggtcaacagtttgcccagttt 120
|||||||||||||||||||| | |||||||||||| | || || |||||||| |||||
Sbjct: 375 tccattgctcagggaccagatgatgacataccggcaccaggccagcagtttgcgcagttc 434
Query: 121 ggtgctggttgcttctggggtgttgagctggccttccagagggtatctggggtgaccaag 180
|||||||| ||||| ||||| |||||| |||||||||||||||| ||||||||||||||
Sbjct: 435 ggtgctggctgcttttggggcgttgagttggccttccagagggtgcctggggtgaccaag 494
Query: 181 acagaggttggttatagccagggcctcttgcataatccaagatatgaggatgtctgctct 240
|| || |||||||| ||||| | |||||||| ||||| ||||||||||| | ||
Sbjct: 495 actgaagttggttactcacaggggattttgcataacccaagctatgaggatgtgtcttca 554
Query: 241 gggactacaaaccactcagaggttgtcagggtccagtatgatcctaaagactgtagctat 300
||||| || |||||| ||||| |||| || ||||| |||||||| |||| ||| ||||
Sbjct: 555 gggaccactaaccacgcagagattgtaagagtccaatatgatcccaaagcatgtggctac 614
Query: 301 gggtctctgcttgatgtgttctgggctagacacgatcctaccgcactgaaccggcagggg 360
| |||||| ||||||||||||||||||||||| ||||||||| ||||||| | ||||||
Sbjct: 615 gagtctctacttgatgtgttctgggctagacatgatcctaccacactgaatagacagggg 674
Query: 361 agtgatgtgggaactcaatacaggtctggaatatactattacacacctgagcaagagaaa 420
| |||||||||||| || ||||| ||||||||||||| ||||| ||||| |||||||||
Sbjct: 675 aatgatgtgggaacacattacagatctggaatatacttctacactcctgaacaagagaaa 734
Query: 421 gaagcccaagaatctctggagcaacaacagaagaagttgaacaggaagattgtcacagag 480
| ||| || || ||| |||| ||||| |||||| ||||||||||||||||||| | |||
Sbjct: 735 gcagctcaggagtctttggaacaacatcagaagcagttgaacaggaagattgtttctgag 794
Query: 481 attcttcctgccaagaagttctacagggcagaagaataccatcaacagtaccttgagaaa 540
|| | ||||||||||||||||||||||||||| || ||||||||||||||||| | ||||
Sbjct: 795 atccatcctgccaagaagttctacagggcagaggagtaccatcaacagtacctcgcgaaa 854
Query: 541 gggggtcgatttggttccaagcaatcttcttctaagggatgcaatgatccaattcgatgc 600
|| ||| ||||||||| ||| |||||| ||||||| |||||||||||||||||||| |||
Sbjct: 855 ggaggtagatttggtttcaaacaatctacttctaaaggatgcaatgatccaattcggtgc 914
Query: 601 tatggttaa 609
|||||||||
Sbjct: 915 tatggttaa 923
>gnl|LJGI|TC63936 similar to UniRef100_Q6QPJ5 Cluster: Methionine sulfoxide reductase
A; n=1; Populus trichocarpa x Populus deltoides|Rep:
Methionine sulfoxide reductase A - Populus jackii (Balm
of Gilead) (Populus trichocarpa x Populusdeltoides),
partial (95%)
Length = 829
Score = 63.9 bits (32), Expect = 1e-09
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 464 ggaagattgtcacagagattcttcctgccaagaagttctacagggcagaagaataccatc 523
||||| |||| ||||| |||||||| || |||| ||||||||| ||||| ||||||||||
Sbjct: 490 ggaaggttgtgacagaaattcttccagcaaagaggttctacagagcagaggaataccatc 549
Query: 524 aacagtaccttgagaa 539
| || || ||||||||
Sbjct: 550 agcaatatcttgagaa 565