Miyakogusa Predicted Gene

Lj2g3v3149230.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3149230.1 Non Chatacterized Hit- tr|I1HSF4|I1HSF4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,52.38,8e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.40486.1
         (486 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS327076 similar to UniRef100_Q93ZG0 Cluster: AT4g27020...   963   0.0  

>gnl|LJGI|FS327076 similar to UniRef100_Q93ZG0 Cluster: AT4g27020/F10M23_360; n=1;
           Arabidopsis thaliana|Rep: AT4g27020/F10M23_360 -
           Arabidopsis thaliana (Mouse-ear cress), partial (87%)
          Length = 768

 Score =  963 bits (486), Expect = 0.0
 Identities = 486/486 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttcctcttcttcttcctcttcaccatcatcatctctactcttcaaggtagcatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34  atggcttcctcttcttcttcctcttcaccatcatcatctctactcttcaaggtagcatgg 93

                                                                       
Query: 61  ttcagcaccttcctcgtatccctcacaggcctccaagtctcggccttgaaatctccattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  ttcagcaccttcctcgtatccctcacaggcctccaagtctcggccttgaaatctccattt 153

                                                                       
Query: 121 caccctcaagaccttcttcctgtgctgccgaagcaggtgtcatggcccatcatgaacacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 caccctcaagaccttcttcctgtgctgccgaagcaggtgtcatggcccatcatgaacacc 213

                                                                       
Query: 181 ctccacagcgcagtggatattctcccactctatgtgggtgctgcttcttccccaaatcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ctccacagcgcagtggatattctcccactctatgtgggtgctgcttcttccccaaatcaa 273

                                                                       
Query: 241 atcgacgagtggaaaggtgcttgcttttaccagaacacagcttggatggagtttcacaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atcgacgagtggaaaggtgcttgcttttaccagaacacagcttggatggagtttcacaac 333

                                                                       
Query: 301 aagtccggctctgaatttgggggtggtacccttcatataaaggttagcaatgctcatagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aagtccggctctgaatttgggggtggtacccttcatataaaggttagcaatgctcatagt 393

                                                                       
Query: 361 tggacatgcctagatctttatatttttgccaccccgtatcgtgtaacatgggattattat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tggacatgcctagatctttatatttttgccaccccgtatcgtgtaacatgggattattat 453

                                                                       
Query: 421 ttcctggctcgtgagcatacacttgagatcaaagaatgggaagggaaagctgagtatgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttcctggctcgtgagcatacacttgagatcaaagaatgggaagggaaagctgagtatgag 513

                 
Query: 481 tatgta 486
           ||||||
Sbjct: 514 tatgta 519