Miyakogusa Predicted Gene
- Lj2g3v3110960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3110960.1 tr|G7K3F1|G7K3F1_MEDTR Citrate synthase
OS=Medicago truncatula GN=MTR_5g091930 PE=3
SV=1,88.87,0,Citrate_synt,Citrate synthase-like; SUBFAMILY NOT
NAMED,NULL; CITRATE SYNTHASE,Citrate synthase-like,CUFF.39763.1
(1539 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73380 similar to UniRef100_Q9SJH7 Cluster: Citrate sy... 955 0.0
gnl|LJGI|TC75320 homologue to UniRef100_P49299 Cluster: Citrate ... 948 0.0
gnl|LJGI|BW598104 similar to UniRef100_P49299 Cluster: Citrate s... 523 e-147
gnl|LJGI|BI420558 similar to UniRef100_Q9SJH7 Cluster: Citrate s... 496 e-139
gnl|LJGI|TC65923 similar to UniRef100_A7PJZ1 Cluster: Citrate sy... 347 1e-94
gnl|LJGI|TC64048 homologue to UniRef100_P49299 Cluster: Citrate ... 244 1e-63
gnl|LJGI|AV769115 similar to UniRef100_A7PJZ2 Cluster: Chromosom... 161 2e-38
>gnl|LJGI|TC73380 similar to UniRef100_Q9SJH7 Cluster: Citrate synthase 3,
peroxisomal precursor; n=2; Arabidopsis thaliana|Rep:
Citrate synthase 3, peroxisomal precursor - Arabidopsis
thaliana (Mouse-ear cress), partial (22%)
Length = 588
Score = 955 bits (482), Expect = 0.0
Identities = 485/486 (99%)
Strand = Plus / Plus
Query: 1 atgtcaaccgattcagaatcaaccaccatgctcgctcgcggccgtttggccatgctcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atgtcaaccgattcagaatcaaccaccatgctcgctcgcggccgtttggccatgctcaca 162
Query: 61 gctcacttgctcccttccagctacaccgaaaccaccaccgatcacgtcctccctcaccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gctcacttgctcccttccagctacaccgaaaccaccaccgatcacgtcctccctcaccgc 222
Query: 121 ctctccgctcagtcaccgccgtcaaccaccctcaacggcaccttaaccatcgtcgacgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ctctccgctcagtcaccgccgtcaaccaccctcaacggcaccttaaccatcgtcgacgag 282
Query: 181 agaaccggcaagaagtaccaggtcgaggtctcccaagatggcactgtcagagctagtgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agaaccggcaagaagtaccaggtcgaggtctcccaagatggcactgtcagagctagtgac 342
Query: 241 ttcaagaagatatcaaccgggaagaatgacaagggactcaagctttatgatcctggctat 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttcaagaagatagcaaccgggaagaatgacaagggactcaagctttatgatcctggctat 402
Query: 301 ttaaacacagctccggttcgatcaactattagttacattgatggtgatgaggggattctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttaaacacagctccggttcgatcaactattagttacattgatggtgatgaggggattctt 462
Query: 361 agatatagaggctacccaattgaggagttggcagagaaaagcacttttgtggaagtgtcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 agatatagaggctacccaattgaggagttggcagagaaaagcacttttgtggaagtgtcc 522
Query: 421 tatctcataatgtatgggagtttgccttctgaaagccagttagcggaatggaatttcgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tatctcataatgtatgggagtttgccttctgaaagccagttagcggaatggaatttcgct 582
Query: 481 atatct 486
||||||
Sbjct: 583 atatct 588
>gnl|LJGI|TC75320 homologue to UniRef100_P49299 Cluster: Citrate synthase, glyoxysomal
precursor; n=1; Cucurbita maxima|Rep: Citrate synthase,
glyoxysomal precursor - Cucurbita maxima (Pumpkin)
(Winter squash), partial (31%)
Length = 478
Score = 948 bits (478), Expect = 0.0
Identities = 478/478 (100%)
Strand = Plus / Plus
Query: 849 cttcatcctgcatgctgaacatgaaatgaactgctctacgtctgctgtccggcaccttgc 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttcatcctgcatgctgaacatgaaatgaactgctctacgtctgctgtccggcaccttgc 60
Query: 909 atcaagtggcgttgatgtatacactgctattgctggggctgttggagctctgtatgggcc 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcaagtggcgttgatgtatacactgctattgctggggctgttggagctctgtatgggcc 120
Query: 969 tcttcacggtggagctaatgaggctgtcctcaaaatgctgagtgaaattgggactgttga 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcttcacggtggagctaatgaggctgtcctcaaaatgctgagtgaaattgggactgttga 180
Query: 1029 gaacattccagaattcattgaaggtgtcaaagccaggaaacaaaagctctctggttttgg 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaacattccagaattcattgaaggtgtcaaagccaggaaacaaaagctctctggttttgg 240
Query: 1089 acaccgagtgtataaaaactatgatcccagagcaaaggtcctaagaaaactgactgagga 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaccgagtgtataaaaactatgatcccagagcaaaggtcctaagaaaactgactgagga 300
Query: 1149 agtgttttccattgttggccgggatcctcttatcgagattgcagttgccttggagaagat 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtgttttccattgttggccgggatcctcttatcgagattgcagttgccttggagaagat 360
Query: 1209 cgctctatctgatgaatatttcatcaagaggaagctttatccaaatgttgacttctactc 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgctctatctgatgaatatttcatcaagaggaagctttatccaaatgttgacttctactc 420
Query: 1269 tggattaatttatagggccatggggtttcctcctgagtatttcacagttttatttgct 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggattaatttatagggccatggggtttcctcctgagtatttcacagttttatttgct 478
>gnl|LJGI|BW598104 similar to UniRef100_P49299 Cluster: Citrate synthase, glyoxysomal
precursor; n=1; Cucurbita maxima|Rep: Citrate synthase,
glyoxysomal precursor - Cucurbita maxima (Pumpkin)
(Winter squash), partial (28%)
Length = 482
Score = 523 bits (264), Expect = e-147
Identities = 396/440 (90%)
Strand = Plus / Plus
Query: 683 agattacaacaattgctgctgcagtttatcttagaatggcaggaaggccgcctgtgcttc 742
|||||||||||||||||||||| || |||||||| ||| ||||||||| || |||||||
Sbjct: 43 agattacaacaattgctgctgcgattaatcttagattggtaggaaggccaccggtgcttc 102
Query: 743 catccaacaacctttcttacacagagaacttcctatacatgctagattctttaggcaatc 802
|||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 103 catccaacaaactttcttacacagagaacttcttatacatgctagattctctaggcaatc 162
Query: 803 ggtcatataaacccaatcctcggctaactcgtgctctggacattatcttcatcctgcatg 862
||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 163 ggtcatacaaacctaatcctcgtctaactcgtgcactggacattatcttcatcctgcatg 222
Query: 863 ctgaacatgaaatgaactgctctacgtctgctgtccggcaccttgcatcaagtggcgttg 922
| |||||||||||||| |||||||| || |||| || || ||||| |||||||| ||||
Sbjct: 223 cagaacatgaaatgaattgctctacatccactgtacgtcatcttgcgtcaagtggtgttg 282
Query: 923 atgtatacactgctattgctggggctgttggagctctgtatgggcctcttcacggtggag 982
||||||| ||||||||||||||||| ||||||||||| ||||| || ||||| |||||||
Sbjct: 283 atgtatatactgctattgctggggcagttggagctctatatggaccacttcatggtggag 342
Query: 983 ctaatgaggctgtcctcaaaatgctgagtgaaattgggactgttgagaacattccagaat 1042
|||||||||| |||||||||||||||||||||||||| |||||||| |||||||| || |
Sbjct: 343 ctaatgaggcggtcctcaaaatgctgagtgaaattggaactgttgataacattccggagt 402
Query: 1043 tcattgaaggtgtcaaagccaggaaacaaaagctctctggttttggacaccgagtgtata 1102
||||||| ||||| ||||||||||||| ||||||| |||||||||||| || ||||| |
Sbjct: 403 tcattgagggtgttaaagccaggaaacgaaagctcagtggttttggacatcgtgtgtaca 462
Query: 1103 aaaactatgatcccagagca 1122
|||||||||| |||||||||
Sbjct: 463 aaaactatgaccccagagca 482
>gnl|LJGI|BI420558 similar to UniRef100_Q9SJH7 Cluster: Citrate synthase 3, peroxisomal
precursor; n=2; Arabidopsis thaliana|Rep: Citrate
synthase 3, peroxisomal precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (20%)
Length = 517
Score = 496 bits (250), Expect = e-139
Identities = 259/262 (98%)
Strand = Plus / Plus
Query: 804 gtcatataaacccaatcctcggctaactcgtgctctggacattatcttcatcctgcatgc 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcatataaacccaatcctcggctaactcgtgctctggacattatcttcatcctgcatgc 60
Query: 864 tgaacatgaaatgaactgctctacgtctgctgtccggcaccttgcatcaagtggcgttga 923
||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||
Sbjct: 61 tgaacatgaaatgaactgctctacgtctgctgtccggcaccttgctttatgtggcgttga 120
Query: 924 tgtatacactgctattgctggggctgttggagctctgtatgggcctcttcacggtggagc 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtatacactgctattgctggggctgttggagctctgtatgggcctcttcacggtggagc 180
Query: 984 taatgaggctgtcctcaaaatgctgagtgaaattgggactgttgagaacattccagaatt 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taatgaggctgtcctcaaaatgctgagtgaaattgggactgttgagaacattccagaatt 240
Query: 1044 cattgaaggtgtcaaagccagg 1065
||||||||||||||||||||||
Sbjct: 241 cattgaaggtgtcaaagccagg 262
Score = 103 bits (52), Expect = 3e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1063 aggaaacaaaagctctctggttttggacaccgagtgtataaaaactatgatc 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aggaaacaaaagctctctggttttggacaccgagtgtataaaaactatgatc 517
>gnl|LJGI|TC65923 similar to UniRef100_A7PJZ1 Cluster: Citrate synthase; n=2; Vitis
vinifera|Rep: Citrate synthase - Vitis vinifera (Grape),
partial (34%)
Length = 784
Score = 347 bits (175), Expect = 1e-94
Identities = 343/399 (85%)
Strand = Plus / Plus
Query: 203 tcgaggtctcccaagatggcactgtcagagctagtgacttcaagaagatatcaaccggga 262
||||||| |||| ||||| || |||| ||| | |||| ||||||||||||| || ||||
Sbjct: 386 tcgaggtgtcccctgatggtaccgtcaaagccactgacctcaagaagatatccactggga 445
Query: 263 agaatgacaagggactcaagctttatgatcctggctatttaaacacagctccggttcgat 322
|| |||||||||||||||| |||||||| ||||||||||||||||| ||||| || ||||
Sbjct: 446 aggatgacaagggactcaaactttatgaccctggctatttaaacactgctcctgtccgat 505
Query: 323 caactattagttacattgatggtgatgaggggattcttagatatagaggctacccaattg 382
|||| ||| ||| || |||||||||||||| || |||||||||||||| ||||| ||||
Sbjct: 506 caacaatttcttatatagatggtgatgagggaatccttagatatagaggatacccgattg 565
Query: 383 aggagttggcagagaaaagcacttttgtggaagtgtcctatctcataatgtatgggagtt 442
||||||||||||| |||||||| ||| ||||| | ||||||||||||||||| | |
Sbjct: 566 aggagttggcagataaaagcacctttccagaagttgcatatctcataatgtatggaaatc 625
Query: 443 tgccttctgaaagccagttagcggaatggaatttcgctatatctcagcattcagctgttc 502
||||||||||||| |||||||| || ||| | || || |||||||||||||||||||| |
Sbjct: 626 tgccttctgaaagtcagttagcagactgggagtttgccatatctcagcattcagctgtac 685
Query: 503 cacaaggagttttggatatcatacaatcaatgcctcatgatgcacatcctatgggtgtgc 562
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||
Sbjct: 686 cacaaggagttttggatatcatacaagcaatgccccatgatgcacatcctatgggcatgc 745
Query: 563 ttgttaatgcattaagtgccctctctgtttttcatcctg 601
|||| ||||| | ||||| | ||||||||||||||||
Sbjct: 746 ttgtgaatgccatgagtgctttatctgtttttcatcctg 784
>gnl|LJGI|TC64048 homologue to UniRef100_P49299 Cluster: Citrate synthase, glyoxysomal
precursor; n=1; Cucurbita maxima|Rep: Citrate synthase,
glyoxysomal precursor - Cucurbita maxima (Pumpkin)
(Winter squash), partial (14%)
Length = 653
Score = 244 bits (123), Expect = 1e-63
Identities = 195/219 (89%)
Strand = Plus / Plus
Query: 1270 ggattaatttatagggccatggggtttcctcctgagtatttcacagttttatttgctatc 1329
|||||||| |||||||| ||||||||||||||||| | |||||| |||||||||||||||
Sbjct: 1 ggattaatatatagggcaatggggtttcctcctgaatttttcactgttttatttgctatc 60
Query: 1330 cctcgaatggcggggtacttggcacattggaaagagtccttggatgatcctgatacaaag 1389
||||||||||| ||||| |||||||||||| ||||||||||||||| |||||||||||
Sbjct: 61 cctcgaatggctgggtatttggcacattggcgagagtccttggatgaccctgatacaaaa 120
Query: 1390 attatgaggcctcaacaggtttatgttggagaatggttgcgtcattatacaccaatcaat 1449
|||||||| |||||||||||||||||||| ||||||||||| ||||||||| | |||||
Sbjct: 121 attatgagacctcaacaggtttatgttggggaatggttgcggcattatacagctatcaaa 180
Query: 1450 aaaaggaccgtatcaagtgatgctgataagcttggtcag 1488
|||| || |||||||| | |||||||||||||||||
Sbjct: 181 caaagaactgtatcaagcaacactgataagcttggtcag 219
>gnl|LJGI|AV769115 similar to UniRef100_A7PJZ2 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 444
Score = 161 bits (81), Expect = 2e-38
Identities = 81/81 (100%)
Strand = Plus / Minus
Query: 1459 gtatcaagtgatgctgataagcttggtcaggtgactacatcaaatgcctcaaagcgacga 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtatcaagtgatgctgataagcttggtcaggtgactacatcaaatgcctcaaagcgacga 385
Query: 1519 ctcgctggatctgggatgtag 1539
|||||||||||||||||||||
Sbjct: 384 ctcgctggatctgggatgtag 364