Miyakogusa Predicted Gene
- Lj2g3v3109510.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3109510.1 Non Chatacterized Hit- tr|F6HNZ6|F6HNZ6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,74.24,7e-17,seg,NULL; PRICHEXTENSN,NULL,CUFF.39755.1
(1341 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65717 similar to UniRef100_A7RPE6 Cluster: Predicted ... 1059 0.0
gnl|LJGI|TC79544 595 e-169
gnl|LJGI|TC69203 143 3e-33
gnl|LJGI|AV407566 weakly similar to UniRef100_A7PJX8 Cluster: Ch... 60 4e-08
gnl|LJGI|TC75755 similar to UniRef100_Q1U817 Cluster: Surface pr... 60 4e-08
>gnl|LJGI|TC65717 similar to UniRef100_A7RPE6 Cluster: Predicted protein; n=1;
Nematostella vectensis|Rep: Predicted protein -
Nematostella vectensis (Starlet sea anemone), partial
(4%)
Length = 964
Score = 1059 bits (534), Expect = 0.0
Identities = 560/570 (98%), Gaps = 9/570 (1%)
Strand = Plus / Plus
Query: 772 ggaagttacaatccaaccccatcaactccccccggaagtggaagctatgatccaaccccg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaagttacaatccaaccccatcaactccccccggaagtggaagctatgatccaaccccg 60
Query: 832 tcaccaccatcaggaagtggcagttacactccaactccaactccatcaacaccctcaggt 891
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 tcaccaccatcaggaagtggcagttacactccaactccaactccgtcaacaccctcaggt 120
Query: 892 ggcaactgtgcacctccatatacaccttctgatccaacacccacaactccatcaacacca 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcaactgtgcacctccatatacaccttctgatccaacacccacaactccatcaacacca 180
Query: 952 tcaacaccttcaacaccatcaaaccctccctcaggaggcagtggttactacaactcacca 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaacaccttcaacaccatcaaaccctccctcaggaggcagtggttactacaactcacca 240
Query: 1012 ccaacttatggaggtgatagcccaccttctgatccaacacccacaactccatcaacacct 1071
|||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 ccaacttatggaggtgatagcccaccttctgatccaac---------tccatcaacacct 291
Query: 1072 tcaacaccatcaagccctccctcaggaggcagtggttactacaactccccaccaacttat 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tcaacaccatcaagccctccctcaggaggcagtggttactacaactccccaccaacttat 351
Query: 1132 ggaggtgatagccccccaacaccaatcactctgagcccaccaagcaccccaattgaccca 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ggaggtgatagccccccaacaccaatcactctgagcccaccaagcaccccaattgaccca 411
Query: 1192 ggcacccccactatttccacaccccctttccttcctgccccatctcccttcactggtaca 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggcacccccactatttccacaccccctttccttcctgccccatctcccttcactggtaca 471
Query: 1252 tgcaactactggaatactcacccaggaatcatttggggattgctaggttggtggggaacc 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tgcaactactggaatactcacccaggaatcatttggggattgctaggttggtggggaacc 531
Query: 1312 ttaggcaatacatttggtgcatctagcttt 1341
||||||||||||||||||||||||||||||
Sbjct: 532 ttaggcaatacatttggtgcatctagcttt 561
Score = 125 bits (63), Expect = 8e-28
Identities = 87/95 (91%)
Strand = Plus / Plus
Query: 382 ggaagttacaatccaaccccatcaactcccccaggaagtggaagctatgatccaacccca 441
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 ggaagttacaatccaaccccatcaactccccccggaagtggaagctatgatccaaccccg 60
Query: 442 tcaccaccctcaggtgatggaagttacaatccaac 476
|||||||| ||||| ||| ||||||| ||||||
Sbjct: 61 tcaccaccatcaggaagtggcagttacactccaac 95
Score = 119 bits (60), Expect = 5e-26
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 694 ggaagttacaatccaaccccatcaactcccccaggaagtggaagctatgatccaacccca 753
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 ggaagttacaatccaaccccatcaactccccccggaagtggaagctatgatccaaccccg 60
Query: 754 tcaccacc 761
||||||||
Sbjct: 61 tcaccacc 68
Score = 111 bits (56), Expect = 1e-23
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 460 ggaagttacaatccaaccccatcaactcccccaagaagtggaagctatgatccaacccca 519
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 ggaagttacaatccaaccccatcaactccccccggaagtggaagctatgatccaaccccg 60
Query: 520 tcaccacc 527
||||||||
Sbjct: 61 tcaccacc 68
Score = 109 bits (55), Expect = 5e-23
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 621 ttacaatccaaccccatcaactcccccaggaagtggaagctatgatccaaccccatcacc 680
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 6 ttacaatccaaccccatcaactccccccggaagtggaagctatgatccaaccccgtcacc 65
Query: 681 acc 683
|||
Sbjct: 66 acc 68
Score = 93.7 bits (47), Expect = 3e-18
Identities = 83/95 (87%)
Strand = Plus / Plus
Query: 304 ggaagctacaatccaaccccatcaacacccccaggcggtggaagctatgatccaacccca 363
||||| |||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 1 ggaagttacaatccaaccccatcaactccccccggaagtggaagctatgatccaaccccg 60
Query: 364 tcaccaccctcaggtgatggaagttacaatccaac 398
|||||||| ||||| ||| ||||||| ||||||
Sbjct: 61 tcaccaccatcaggaagtggcagttacactccaac 95
Score = 81.8 bits (41), Expect = 1e-14
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 541 agttacaatccaaccccatcaactcccccgggcagcggaagctatgatccaac 593
||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 4 agttacaatccaaccccatcaactccccccggaagtggaagctatgatccaac 56
Score = 56.0 bits (28), Expect = 6e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 265 ggaagtcacaaaccaaccccatgcactccccctggcagtggaagctacaatccaacccca 324
|||||| |||| |||||||||| |||||||| || ||||||||||| ||||||||||
Sbjct: 1 ggaagttacaatccaaccccatcaactccccccggaagtggaagctatgatccaaccccg 60
Query: 325 tcaacacc 332
||| ||||
Sbjct: 61 tcaccacc 68
>gnl|LJGI|TC79544
Length = 334
Score = 595 bits (300), Expect = e-169
Identities = 300/300 (100%)
Strand = Plus / Plus
Query: 1 atggagaggaagggaagcaactttgcttttcttaccatgttcacattgctagctggattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 atggagaggaagggaagcaactttgcttttcttaccatgttcacattgctagctggattg 94
Query: 61 ctttctaagaacattgtcatcactgcaatagcaagcaccagtattgaagaccagaaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 ctttctaagaacattgtcatcactgcaatagcaagcaccagtattgaagaccagaaaaac 154
Query: 121 tattacactccagacccaaatgctggaactcctccctcagggtcacatggtccaccctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tattacactccagacccaaatgctggaactcctccctcagggtcacatggtccaccctct 214
Query: 181 catcactctggaggtggtcatggaagcaaaccaccctctcatcactctgggggtggtcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 catcactctggaggtggtcatggaagcaaaccaccctctcatcactctgggggtggtcat 274
Query: 241 ggaaccccatcacatggaggtggtggaagtcacaaaccaaccccatgcactccccctggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ggaaccccatcacatggaggtggtggaagtcacaaaccaaccccatgcactccccctggc 334
>gnl|LJGI|TC69203
Length = 623
Score = 143 bits (72), Expect = 3e-33
Identities = 135/156 (86%)
Strand = Plus / Plus
Query: 1175 gcaccccaattgacccaggcacccccactatttccacaccccctttccttcctgccccat 1234
|||||||||||||||| |||||||| | || || ||||||||||| | ||||||||||
Sbjct: 36 gcaccccaattgaccctggcaccccaagcatcccctcaccccctttcttccctgccccat 95
Query: 1235 ctcccttcactggtacatgcaactactggaatactcacccaggaatcatttggggattgc 1294
||||||||||||| |||||||||||||||| |||||||||||||||||||||||| | |
Sbjct: 96 ctcccttcactggcacatgcaactactggagcactcacccaggaatcatttggggaatcc 155
Query: 1295 taggttggtggggaaccttaggcaatacatttggtg 1330
| || |||||||||| ||||| | | |||||||||
Sbjct: 156 ttggctggtggggaaatttagggagtgcatttggtg 191
>gnl|LJGI|AV407566 weakly similar to UniRef100_A7PJX8 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 321
Score = 60.0 bits (30), Expect = 4e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 112 cagaaaaactattacactccagacccaaatgctggaactcctccctcagg 161
||||| ||||||||||||||||| ||| ||||||| ||||||||| ||||
Sbjct: 165 cagaagaactattacactccagatccacatgctgggactcctcccacagg 214
>gnl|LJGI|TC75755 similar to UniRef100_Q1U817 Cluster: Surface protein from
Gram-positive cocci, anchor region; n=1; Lactobacillus
reuteri 100-23|Rep: Surface protein from Gram-positive
cocci, anchor region - Lactobacillus reuteri 100-23,
partial (4%)
Length = 472
Score = 60.0 bits (30), Expect = 4e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 112 cagaaaaactattacactccagacccaaatgctggaactcctccctcagg 161
||||| ||||||||||||||||| ||| ||||||| ||||||||| ||||
Sbjct: 165 cagaagaactattacactccagatccacatgctgggactcctcccacagg 214