Miyakogusa Predicted Gene

Lj2g3v3103790.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3103790.1 tr|G7KD42|G7KD42_MEDTR Conserved oligomeric Golgi
complex subunit OS=Medicago truncatula GN=MTR_5g09,94.09,0,seg,NULL;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; CONSERVED OLIGOMERIC GOLGI
COMPLEX COMPONENT 5,NODE_13046_length_2215_cov_144.518280.path2.1
         (1683 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67530 similar to UniRef100_A7PJU6 Cluster: Chromosome...   549   e-155

>gnl|LJGI|TC67530 similar to UniRef100_A7PJU6 Cluster: Chromosome chr12 scaffold_18,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_18, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (21%)
          Length = 670

 Score =  549 bits (277), Expect = e-155
 Identities = 277/277 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1407 gccaccaaacgtcatacttcatcatctatatacgcgtggtcctgaagatttgcagtcacc 1466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gccaccaaacgtcatacttcatcatctatatacgcgtggtcctgaagatttgcagtcacc 60

                                                                        
Query: 1467 actgcaaagaaacaaactaacaccattgcagtattcattgtggctagattctcaagggga 1526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   actgcaaagaaacaaactaacaccattgcagtattcattgtggctagattctcaagggga 120

                                                                        
Query: 1527 ggatcaaatctggaagggcatcaaagcaacacttgatgattatgctataaatgtgaggag 1586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ggatcaaatctggaagggcatcaaagcaacacttgatgattatgctataaatgtgaggag 180

                                                                        
Query: 1587 cagaggagataaggagtttagccctgtttatcctcttatgcttcaattgggttcaacgtt 1646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  cagaggagataaggagtttagccctgtttatcctcttatgcttcaattgggttcaacgtt 240

                                                 
Query: 1647 aactgaaaagattcaagcttcctcaaagccttgattg 1683
            |||||||||||||||||||||||||||||||||||||
Sbjct: 241  aactgaaaagattcaagcttcctcaaagccttgattg 277