Miyakogusa Predicted Gene
- Lj2g3v3085360.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3085360.2 tr|G7KD27|G7KD27_MEDTR Ribosomal RNA small
subunit methyltransferase B OS=Medicago truncatula
GN=MTR,81.52,0,NOL1_NOP2_SUN,Bacterial Fmu (Sun)/eukaryotic nucleolar
NOL1/Nop2p, conserved site; PUA,Pseudouridine,CUFF.39691.2
(1833 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60321 similar to UniRef100_A7PJT6 Cluster: Chromosome... 1172 0.0
gnl|LJGI|TC67930 similar to UniRef100_A7PJT6 Cluster: Chromosome... 571 e-162
>gnl|LJGI|TC60321 similar to UniRef100_A7PJT6 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 729
Score = 1172 bits (591), Expect = 0.0
Identities = 591/591 (100%)
Strand = Plus / Plus
Query: 130 gatcgatattccttcaacccaaccctgcaatggaaccctcaactccaccactacttcctc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gatcgatattccttcaacccaaccctgcaatggaaccctcaactccaccactacttcctc 198
Query: 190 aaagcctatggctcccaccgcttctctctcatctccgccgctctaacgcgtccttctcgc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aaagcctatggctcccaccgcttctctctcatctccgccgctctaacgcgtccttctcgc 258
Query: 250 tactcctgtattcgcgtaaactccctcaggtcaacaaccgacgctgtcatcgagaagctg 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tactcctgtattcgcgtaaactccctcaggtcaacaaccgacgctgtcatcgagaagctg 318
Query: 310 cgctcgctcgtgaaccagcaaccgccgtcgaacgccgaggatgaggtggtgaacccgttg 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cgctcgctcgtgaaccagcaaccgccgtcgaacgccgaggatgaggtggtgaacccgttg 378
Query: 370 aaggactgtgacggttctgctgctgctcctttttccaaatgccgcattcctggcctagat 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaggactgtgacggttctgctgctgctcctttttccaaatgccgcattcctggcctagat 438
Query: 430 tacgttgtgtttgtttggggttcgggaccgcaccggattgattacggccgtgatgctgat 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tacgttgtgtttgtttggggttcgggaccgcaccggattgattacggccgtgatgctgat 498
Query: 490 gcacctcccaaggaggttattgttagtaggaagtgtgctgaggctgttcttcgcggcgcg 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gcacctcccaaggaggttattgttagtaggaagtgtgctgaggctgttcttcgcggcgcg 558
Query: 550 caggtgtatgttcctggtatagtggcttgcagtgctcatgttgaggaaggggatacagtt 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 caggtgtatgttcctggtatagtggcttgcagtgctcatgttgaggaaggggatacagtt 618
Query: 610 gcagtttcagttgctgtagagcagcagggtagtagtgggggatggagtgctggtatgacg 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gcagtttcagttgctgtagagcagcagggtagtagtgggggatggagtgctggtatgacg 678
Query: 670 cgtggtactgttctccaaggatcacagacagatccatattatactgaacga 720
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cgtggtactgttctccaaggatcacagacagatccatattatactgaacga 729
Score = 182 bits (92), Expect = 5e-45
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 atgaagaaagggagggacttgcttatcgccaccagtcgcagaaccagaaccctccctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 atgaagaaagggagggacttgcttatcgccaccagtcgcagaaccagaaccctccctcaa 69
Query: 61 ccaccatcttctccgtttcaagaagcaatgca 92
||||||||||||||||||||||||||||||||
Sbjct: 70 ccaccatcttctccgtttcaagaagcaatgca 101
>gnl|LJGI|TC67930 similar to UniRef100_A7PJT6 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 657
Score = 571 bits (288), Expect = e-162
Identities = 288/288 (100%)
Strand = Plus / Plus
Query: 1546 cggccaggtggagtaatagtctattccacttgtacgattaatcctggtgagaatgaggcg 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggccaggtggagtaatagtctattccacttgtacgattaatcctggtgagaatgaggcg 60
Query: 1606 ttagttcgatatgctttggataaatacaaatacctgtcattggcaccacagcacccaaga 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttagttcgatatgctttggataaatacaaatacctgtcattggcaccacagcacccaaga 120
Query: 1666 attggaggacctggtctagttggtagctttgaatttcctgatggatatgtagacgagtgg 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attggaggacctggtctagttggtagctttgaatttcctgatggatatgtagacgagtgg 180
Query: 1726 ttacgacctggtgaggaagaccttgttcaaagatttgatccatcatctccccttgataca 1785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttacgacctggtgaggaagaccttgttcaaagatttgatccatcatctccccttgataca 240
Query: 1786 attggatttttcattgctaaatttgctgtggggtctaaagacacctga 1833
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attggatttttcattgctaaatttgctgtggggtctaaagacacctga 288