Miyakogusa Predicted Gene

Lj2g3v3084250.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3084250.1 Non Chatacterized Hit- tr|K3VNP0|K3VNP0_FUSPC
Uncharacterized protein OS=Fusarium pseudograminearum ,30.91,2.6,
,gene.g44155.t1.1
         (303 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82666                                                      448   e-126
gnl|LJGI|TC66833                                                       72   2e-12

>gnl|LJGI|TC82666 
          Length = 710

 Score =  448 bits (226), Expect = e-126
 Identities = 240/242 (99%), Gaps = 2/242 (0%)
 Strand = Plus / Plus

                                                                       
Query: 62  catgtccagagcaaacaagatggcatgtgcttcgaggactccatccctcagtccattcaa 121
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1   catgtccagagcaaacaagatggcatgtgcttcgaggactccatccct-agtccattcaa 59

                                                                       
Query: 122 gtacgttgcactcatcagatgatgagactcttgtgagttctggaagacttcaatctcagc 181
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 60  gtacgttgcactcatcagatgatgagactcttg-gagttctggaagacttcaatctcagc 118

                                                                       
Query: 182 atcataaagcccccagaagcagctacccaatcatgcaccagaagccctcatcttccttag 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atcataaagcccccagaagcagctacccaatcatgcaccagaagccctcatcttccttag 178

                                                                       
Query: 242 ttcctgctcatcatcagaatttcttgaaggagcttttctgggtggtgatatgttgggtat 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ttcctgctcatcatcagaatttcttgaaggagcttttctgggtggtgatatgttgggtat 238

             
Query: 302 ag 303
           ||
Sbjct: 239 ag 240


>gnl|LJGI|TC66833 
          Length = 691

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                       
Query: 60  tccatgtccagagcaaacaagatggcatgtgcttcgaggactccatccctcagtccattc 119
           |||||||| |||||||   |||||||||||||  | |||| |||||||||||||||||||
Sbjct: 570 tccatgtcaagagcaagtgagatggcatgtgccgctaggagtccatccctcagtccattc 511

                                                   
Query: 120 aagtacgttgcactcatcagatgatgagactcttgtgagt 159
           |||||  |||||||| ||| || |||| ||| || |||||
Sbjct: 510 aagtagattgcactcttcacatcatgacacttttttgagt 471