Miyakogusa Predicted Gene

Lj2g3v3072960.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3072960.1 Non Chatacterized Hit- tr|I1M706|I1M706_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13657
PE,89.42,0,SUBFAMILY NOT NAMED,NULL; CT120 PROTEIN,NULL; TRAM, LAG1
and CLN8 homology domains.,TRAM/LAG1/CLN8 h,CUFF.39678.1
         (825 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593846 weakly similar to UniRef100_A7QV45 Cluster: Ch...   210   1e-53

>gnl|LJGI|DC593846 weakly similar to UniRef100_A7QV45 Cluster: Chromosome undetermined
           scaffold_185, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_185,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (35%)
          Length = 596

 Score =  210 bits (106), Expect = 1e-53
 Identities = 283/342 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttggcttctaaagatattatgaaattcaaatcataccagaaccaggctaatttgttc 60
           ||||||| ||||||||| |||||| |  ||||||| |||||||||||||||||| | |||
Sbjct: 255 atgttggattctaaagaaattatggatctcaaatcttaccagaaccaggctaatatcttc 314

                                                                       
Query: 61  gtgaaggaatatttgttagcagaccctctaattccatatacttccattgttggtggcatt 120
           |||||||| ||| |  |||||||| ||||  |||| || |||||  || |||||||||||
Sbjct: 315 gtgaaggagtatatactagcagactctctggttccgtacacttctgttattggtggcatt 374

                                                                       
Query: 121 tttgcttgcaagatggtctatgatcttactcagctttttagcactattcactttaagagc 180
           ||||||||||| |||||||| ||||||| |||  || || | |||| | |||||||||||
Sbjct: 375 tttgcttgcaaaatggtctacgatcttattcatgttattggtactaattactttaagagc 434

                                                                       
Query: 181 tattctagcctcactaaaatccaacgtattgagtggaataaccgtgctatatcaactata 240
           ||||| ||| |  | ||| ||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 435 tattccagctttgcaaaactccaacgtattgagtggaataaccgagctatatcaactatc 494

                                                                       
Query: 241 catgccatttttataacaactatgtcattgtacttcgtgttctgctcaaatttatattct 300
           ||||||||||| |||||| ||||| ||||  ||| ||| || |||||| || ||| | ||
Sbjct: 495 catgccattttcataacagctatggcattacactacgttttttgctcagatctatttgct 554

                                                     
Query: 301 gacagcgagtcggctgaactaattacggttcgaagctcttca 342
           |||  | ||||  ||||||| |||||  |||||| |||||||
Sbjct: 555 gacgaccagtctactgaacttattacacttcgaaactcttca 596