Miyakogusa Predicted Gene
- Lj2g3v3072950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3072950.1 tr|G7KD14|G7KD14_MEDTR ATP-dependent RNA helicase
A-like protein OS=Medicago truncatula
GN=MTR_5g090,72,0,HA2,Helicase-associated domain; OB_NTP_bind,Domain
of unknown function DUF1605; Helicase_C,Helicase,,CUFF.39677.1
(3525 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71694 similar to UniRef100_A7PJR9 Cluster: Chromosome... 1499 0.0
gnl|LJGI|TC63871 weakly similar to UniRef100_A7PJR9 Cluster: Chr... 777 0.0
gnl|LJGI|TC70795 593 e-168
>gnl|LJGI|TC71694 similar to UniRef100_A7PJR9 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 878
Score = 1499 bits (756), Expect = 0.0
Identities = 771/776 (99%)
Strand = Plus / Plus
Query: 1 atggcgaagaacaaggggaagaataagaagaagagttatgggcacactctcccagttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atggcgaagaacaaggggaagaataagaagaagagttatgggcacactctcccagttgat 162
Query: 61 gaatccaccaggcttcgcttttcccagattctagaacagttctgtgattccaatgatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gaatccaccaggcttcgcttttcccagattctagaacagttctgtgattccaatgatgaa 222
Query: 121 gtgtttaagtttgatgctaatttgtccaacatggaacgtgctttggtgcatcaattatcc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 223 gtgtttaagtttgatgctaatttgtccaacatggaacgtgctttggtgcatcaattgtcc 282
Query: 181 cgaaaaatggggctcaaatcgaaaagtcacgggactgggaacgcgaggagaatttttgtt 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 283 cgaaaaatggggctcaaatcgaaaagtcacgggactgggaatgcgaggagaatttttgtt 342
Query: 241 cagaaattcggaaagatggttgacagggataatgggcctgagaaacttccacatttcaca 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 343 cagaaattcggaaagatggttgacagggataatgggcctgagaaacttcctcatttcaca 402
Query: 301 ttttctcaagaggcaaattgggtattaagtgatttatttactcattatccacctggtgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttttctcaagaggcaaattgggtattaagtgatttatttactcattatccacctggtgat 462
Query: 361 ggacgctcgtgggacatgattggtgaaaataatgacggtgccgatagtagaagacaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ggacgctcgtgggacatgattggtgaaaataatgacggtgccgatagtagaagacaaaat 522
Query: 421 aaggatgatatctttgccaggccttctatgtccaaagctgaaatcgccaagagattgcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aaggatgatatctttgccaggccttctatgtccaaagctgaaatcgccaagagattgcaa 582
Query: 481 acccttcgttctaatactactgcagataacttgaaacagatcaccaaaaatagatctaag 540
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 acccttggttctaatactactgcagataacttgaaacagatcaccaaaaatagatctaag 642
Query: 541 cttccaattgcatctttcaaggatgtaattacatcaactgttgaatcccaccaggtagtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 cttccaattgcatctttcaaggatgtaattacatcaactgttgaatcccaccaggtagtt 702
Query: 601 ctcatatctggtgagactggttgtggaaagactacgcaggtcccacaatttattttggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ctcatatctggtgagactggttgtggaaagactacgcaggtcccacaatttattttggat 762
Query: 661 catatgtggggtaagggcgaggtatgtaaagtagtttgcactcagcctcggcgtatctct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 catatgtggggtaagggcgaggtatgtaaagtagtttgcactcagcctcggcgtatctct 822
Query: 721 gcactttcagtttccgagagaatcgctagtgagagaggtgagactattggagaaaa 776
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 gcaatttcagtttccgagagaatcgctagtgagagaggtgagactattggagaaaa 878
>gnl|LJGI|TC63871 weakly similar to UniRef100_A7PJR9 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 735
Score = 777 bits (392), Expect = 0.0
Identities = 392/392 (100%)
Strand = Plus / Plus
Query: 3058 gttgataccaagtctagtggacactgtgaggacaagtttatgtcttctcctgataatatg 3117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gttgataccaagtctagtggacactgtgaggacaagtttatgtcttctcctgataatatg 186
Query: 3118 gttagaataatcatggaccgttggcttaattttgattcaacagcaattgatattgctcag 3177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gttagaataatcatggaccgttggcttaattttgattcaacagcaattgatattgctcag 246
Query: 3178 ctatactgcttgagagagcgactatctgcaggagttttatacaaagtgacacatccaagg 3237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ctatactgcttgagagagcgactatctgcaggagttttatacaaagtgacacatccaagg 306
Query: 3238 aaacctcttcctcccatcctagaggcttccatgcatgctatagcttgcattttgtcttgt 3297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aaacctcttcctcccatcctagaggcttccatgcatgctatagcttgcattttgtcttgt 366
Query: 3298 gatgggtgctctggcatgccggtgatcgcagatggtttggacatactgaccactatggta 3357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gatgggtgctctggcatgccggtgatcgcagatggtttggacatactgaccactatggta 426
Query: 3358 gatgacacaaatctaggcaagcaagcaacggggacaaagcggttagggaagagaccaaag 3417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gatgacacaaatctaggcaagcaagcaacggggacaaagcggttagggaagagaccaaag 486
Query: 3418 ggatcacttgcagagcttgtatatcataagga 3449
||||||||||||||||||||||||||||||||
Sbjct: 487 ggatcacttgcagagcttgtatatcataagga 518
Score = 77.8 bits (39), Expect = 4e-13
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 3487 aggatcaatcccagaccagttcctcctttcacttgataa 3525
|||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aggatcaatcccagaccagttcctcctttcacttgataa 553
Score = 71.9 bits (36), Expect = 3e-11
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 2932 ctgctttcaacagagattgccgttgctccaggaaaa 2967
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgctttcaacagagattgccgttgctccaggaaaa 36
>gnl|LJGI|TC70795
Length = 551
Score = 593 bits (299), Expect = e-168
Identities = 302/303 (99%)
Strand = Plus / Plus
Query: 3223 gtgacacatccaaggaaacctcttcctcccatcctagaggcttccatgcatgctatagct 3282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gtgacacatccaaggaaacctcttcctcccatcctagaggcttccatgcatgctatagct 169
Query: 3283 tgcattttgtcttgtgatgggtgctctggcatgccggtgatcgcagatggtttggacata 3342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tgcattttgtcttgtgatgggtgctctggcatgccggtgatcgcagatggtttggacata 229
Query: 3343 ctgaccactatggtagatgacacaaatctaggcaagcaagcaacggggacaaagcggtta 3402
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 230 ctgaccactatggtagatgacacaaatctaggcaagcaagcaacggggacgaagcggtta 289
Query: 3403 gggaagagaccaaagggatcacttgcagagcttgtatatcataaggacgcctatagacct 3462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gggaagagaccaaagggatcacttgcagagcttgtatatcataaggacgcctatagacct 349
Query: 3463 tccaagggcgtaggaggtccaagtaggatcaatcccagaccagttcctcctttcacttga 3522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tccaagggcgtaggaggtccaagtaggatcaatcccagaccagttcctcctttcacttga 409
Query: 3523 taa 3525
|||
Sbjct: 410 taa 412