Miyakogusa Predicted Gene
- Lj2g3v3072930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3072930.1 Non Chatacterized Hit- tr|I1M710|I1M710_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10202
PE,85.77,0,LISH,LisH dimerisation motif; CTLH,CTLH, C-terminal LisH
motif; WD REPEAT PROTEIN 26-RELATED,NULL; C,CUFF.39697.1
(790 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61565 weakly similar to UniRef100_A7QNP3 Cluster: Chr... 1461 0.0
gnl|LJGI|FS319240 similar to UniRef100_A7PJR8 Cluster: Chromosom... 876 0.0
gnl|LJGI|DC593201 similar to UniRef100_A7PJR8 Cluster: Chromosom... 149 3e-35
>gnl|LJGI|TC61565 weakly similar to UniRef100_A7QNP3 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(82%)
Length = 2098
Score = 1461 bits (737), Expect = 0.0
Identities = 767/777 (98%)
Strand = Plus / Plus
Query: 1 atgggaggtgtggaggatgaagaaccagctttgaaacggatgaaattgtcctcgaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atgggaggtgtggaggatgaagaaccagctttgaaacggatgaaattgtcctcgaaagga 314
Query: 61 ttagttggattgtcgaacggttcgtcttctgtggagcctgttgggggcttcttgagtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttagttggattgtcgaacggttcgtcttctgtggagcctgttgggggcttcttgagtgat 374
Query: 121 tcgatggctcggcccctaccgtcccatggggacgaacaagtcgtcggttccaaaggggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcgatggctcggcccctaccgtcccatggggacgaacaagtcgtcggttccaaaggggtg 434
Query: 181 atcaagagggatgagtttgtcaggataattgcgaaggcgttgtattctcttggttacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atcaagagggatgagtttgtcaggataattgcgaaggcgttgtattctcttggttacaga 494
Query: 241 aagagtggagctcatctagaggaggagtcgggaatacctttgcactcacctggggtgaat 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 495 aagagtggagctcatctagaggaggagtcaggaatacctttgcactcacctggggtgaat 554
Query: 301 atgttcatacagcagatactggatgggaattgggatgacagcatagctacattgcacaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 atgttcatacagcagatactggatgggaattgggatgacagcatagctacattgcacaca 614
Query: 361 gttggtctggccgatgaaagcgttgttaggtcggcttcattcttaatattggaacagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gttggtctggccgatgaaagcgttgttaggtcggcttcattcttaatattggaacagaaa 674
Query: 421 ttctttgaacttttacatgcggaaaaggtcatggaagcgttgaagaccttgaggacagag 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 675 ttctttgaacttttacatgcggaaaaggtcatggaagcattgaagaccttgaggacagag 734
Query: 481 atttctccacttagcgtttatagcaatagagttcgtgaactttcttcttgcatggtgtct 540
|||||||||||||| ||||||||||||||| |||||||||||||||||||||| | ||||
Sbjct: 735 atttctccacttagtgtttatagcaatagaattcgtgaactttcttcttgcatagcgtct 794
Query: 541 ccatctcctaagcaagatattttaaaggtgaggtctcggtcgaagcttctggagcaattg 600
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 795 ccatctcctaagcaagatattttagaggtgaggtctcggtcgaagcttttggagcaattg 854
Query: 601 cagaaactgcttcctccaacagtgatgatacctgaaaagaggttggaacatctggttgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 cagaaactgcttcctccaacagtgatgatacctgaaaagaggttggaacatctggttgaa 914
Query: 661 caagccctcatcctgcaacgggaggcttgcccatttcacaactcattggataaggagatg 720
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 915 caagccctcatcctgcaacgggaggcttgcctatttcacaactcattggataaggagatg 974
Query: 721 tcattgtattcagatcatcattgcggaaaagatcaaataccttctaaaacattacag 777
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 975 tcattgtattcagatcatcattgtggaaaagatcaaataccttctaaaacattacag 1031
>gnl|LJGI|FS319240 similar to UniRef100_A7PJR8 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 683
Score = 876 bits (442), Expect = 0.0
Identities = 464/470 (98%), Gaps = 1/470 (0%)
Strand = Plus / Plus
Query: 1 atgggaggtgtggaggatgaagaaccagctttgaaacggatgaaattgtcctcgaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atgggaggtgtggaggatgaagaaccagctttgaaacggatgaaattgtcctcgaaagga 274
Query: 61 ttagttggattgtcgaacggttcgtcttctgtggagcctgttgggggcttcttgagtgat 120
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 275 ttagttggattgtcgaacggttcgtcttctgtagagctggttgggggcttcttgagtgat 334
Query: 121 tcgatggctcggcccctaccgtcccatggggacgaacaagtcgtcggttccaaaggggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcgatggctcggcccctaccgtcccatggggacgaacaagtcgtcggttccaaaggggtg 394
Query: 181 atcaagagggatgagtttgtcaggataattgcgaaggcgttgtattctcttggttacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atcaagagggatgagtttgtcaggataattgcgaaggcgttgtattctcttggttacaga 454
Query: 241 aagagtggagctcatctagaggaggagtcgggaatacctttgcactcacctggggtgaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aagagtggagctcatctagaggaggagtcgggaatacctttgcactcacctggggtgaat 514
Query: 301 atgttcatacagcagatactggatgggaattgggatgacagcatagctacattgcacaca 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 515 atgttcatacagcagatactggatgggaattgggatgacagcatagctacattgcacaaa 574
Query: 361 gttggtctggccgatgaaagcgttgttaggtcggcttcattcttaatattggaacagaaa 420
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 575 gttggtctggccgatgaaagcgttgttaggtcggcttcatttttaatattggaaca-aaa 633
Query: 421 ttctttgaacttttacatgcggaaaaggtcatggaagcgttgaagacctt 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ttctttgaacttttacatgcggaaaaggtcatggaagcgttgaagacctt 683
>gnl|LJGI|DC593201 similar to UniRef100_A7PJR8 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 583
Score = 149 bits (75), Expect = 3e-35
Identities = 186/223 (83%)
Strand = Plus / Plus
Query: 567 ggtgaggtctcggtcgaagcttctggagcaattgcagaaactgcttcctccaacagtgat 626
||||| |||||||||||| | || ||| ||||||| ||||| |||| | |||| ||
Sbjct: 341 ggtgaagtctcggtcgaaattgctagaggaattgcaaaaacttattcccggagcagtaat 400
Query: 627 gatacctgaaaagaggttggaacatctggttgaacaagccctcatcctgcaacgggaggc 686
||||||||| ||||| ||||||||||| |||||||||||||| ||| || || | ||||
Sbjct: 401 gatacctgagaagagattggaacatctagttgaacaagcccttatcttgtaatgataggc 460
Query: 687 ttgcccatttcacaactcattggataaggagatgtcattgtattcagatcatcattgcgg 746
||| ||| |||| ||||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 461 gtgcatgtttaacaattcattggataaggagatgtcattatattcagatcatcactgtgg 520
Query: 747 aaaagatcaaataccttctaaaacattacaggttagaaaatga 789
|||| |||||| ||||||| |||||||||||||||||||||
Sbjct: 521 aaaaactcaaatgccttctaggacattacaggttagaaaatga 563