Miyakogusa Predicted Gene

Lj2g3v3071900.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3071900.1 Non Chatacterized Hit- tr|I3S2R9|I3S2R9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.6,0,RETICULON-RELATED (PLANT),NULL; RETICULON,Reticulon;
seg,NULL; Reticulon,Reticulon,CUFF.39673.1
         (744 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69940 similar to UniRef100_A7PJR5 Cluster: Chromosome...  1475   0.0  
gnl|LJGI|TC76898 weakly similar to UniRef100_A7PJR5 Cluster: Chr...   365   e-100

>gnl|LJGI|TC69940 similar to UniRef100_A7PJR5 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 1114

 Score = 1475 bits (744), Expect = 0.0
 Identities = 744/744 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctgacaaaatcacagctgaaaaccttcttaacacccttgtggaaacaatttctcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 atgtctgacaaaatcacagctgaaaaccttcttaacacccttgtggaaacaatttctcat 161

                                                                       
Query: 61  gctgagcataaaaaatctgtatcattctttgaagaagagaagcctaactcagtgagctcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gctgagcataaaaaatctgtatcattctttgaagaagagaagcctaactcagtgagctcc 221

                                                                       
Query: 121 caattcaatagactgtttggacgccagaaacccgtgcaccatcttctagggggtggaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 caattcaatagactgtttggacgccagaaacccgtgcaccatcttctagggggtggaaaa 281

                                                                       
Query: 181 tctgctgatgtcttgttgtggaggaacaagaagatctctgctggcgttttaactggtgca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tctgctgatgtcttgttgtggaggaacaagaagatctctgctggcgttttaactggtgca 341

                                                                       
Query: 241 acagctatatgggtggtttttgaatggcttaattataatttcctaacacttttgttcttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 acagctatatgggtggtttttgaatggcttaattataatttcctaacacttttgttcttt 401

                                                                       
Query: 301 gctctggctcttggcatgcttgcacagtttctttgggctaatgcttctggcgtgtttggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gctctggctcttggcatgcttgcacagtttctttgggctaatgcttctggcgtgtttggc 461

                                                                       
Query: 361 aggaagtcatctaaagttcctcgttttgttctcccagaagatttcattgtgaatattgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aggaagtcatctaaagttcctcgttttgttctcccagaagatttcattgtgaatattgca 521

                                                                       
Query: 421 actgcggttggctttgaggttaaccgtggtttgagggttcttcaagatgcttcttgtgga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 actgcggttggctttgaggttaaccgtggtttgagggttcttcaagatgcttcttgtgga 581

                                                                       
Query: 481 ggaaaccttaagcaatttcttcttgttgtagtaagcttatgggctggtgctgtgattggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ggaaaccttaagcaatttcttcttgttgtagtaagcttatgggctggtgctgtgattggg 641

                                                                       
Query: 541 agctggtgcaattttttgactgtcatgtatattggttttgttgctgctcatacattccca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 agctggtgcaattttttgactgtcatgtatattggttttgttgctgctcatacattccca 701

                                                                       
Query: 601 gttctgtatgaaaggtatgaggatcaagttgatgactttgtgtacaagttccttggtcag 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gttctgtatgaaaggtatgaggatcaagttgatgactttgtgtacaagttccttggtcag 761

                                                                       
Query: 661 atgcgaaatcaatatcagaagctggattctggcttgcttagcaaaatccccaatggaaag 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 atgcgaaatcaatatcagaagctggattctggcttgcttagcaaaatccccaatggaaag 821

                                   
Query: 721 ttcaaagggaagaagcatgaatag 744
           ||||||||||||||||||||||||
Sbjct: 822 ttcaaagggaagaagcatgaatag 845


>gnl|LJGI|TC76898 weakly similar to UniRef100_A7PJR5 Cluster: Chromosome chr12
           scaffold_18, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (88%)
          Length = 1016

 Score =  365 bits (184), Expect = e-100
 Identities = 475/572 (83%)
 Strand = Plus / Plus

                                                                       
Query: 141 acgccagaaacccgtgcaccatcttctagggggtggaaaatctgctgatgtcttgttgtg 200
           |||||||||| |||| ||||||||| |||| |||||||||||||| ||| ||||||| ||
Sbjct: 247 acgccagaaaaccgtccaccatcttttaggaggtggaaaatctgcggatatcttgttatg 306

                                                                       
Query: 201 gaggaacaagaagatctctgctggcgttttaactggtgcaacagctatatgggtggtttt 260
           ||||||||||||||| ||| || | ||||||||||| |||||| ||  ||||||| ||||
Sbjct: 307 gaggaacaagaagatttcttctagtgttttaactggcgcaacaactgcatgggtgctttt 366

                                                                       
Query: 261 tgaatggcttaattataatttcctaacacttttgttctttgctctggctcttggcatgct 320
           |||||||||||||||| |||| || || |||||   ||||||| ||| ||||||  ||||
Sbjct: 367 tgaatggcttaattatcattttcttactcttttaagctttgctttggttcttggtttgct 426

                                                                       
Query: 321 tgcacagtttctttgggctaatgcttctggcgtgtttggcaggaagtcatctaaagttcc 380
           |||||||||||| ||| | ||||||||| || | |||  ||| | | |||||||||| ||
Sbjct: 427 tgcacagtttctatggtcaaatgcttctagcctttttaacagtacgccatctaaagtgcc 486

                                                                       
Query: 381 tcgttttgttctcccagaagatttcattgtgaatattgcaactgcggttggctttgaggt 440
            |||||| ||||||| ||||| ||| |||||||||||||   ||  ||||||  ||||||
Sbjct: 487 ccgttttattctccccgaagaattctttgtgaatattgctcatgtagttggcgatgaggt 546

                                                                       
Query: 441 taaccgtggtttgagggttcttcaagatgcttcttgtggaggaaaccttaagcaatttct 500
           |||||||||| ||||  |||||||||||  | |||||| ||||||| | |||||| | ||
Sbjct: 547 taaccgtggtctgagatttcttcaagatattgcttgtgaaggaaacttgaagcaactgct 606

                                                                       
Query: 501 tcttgttgtagtaagcttatgggctggtgctgtgattgggagctggtgcaattttttgac 560
             ||||||| | ||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 607 cattgttgttggaagtttgtgggctggtgcagtgattgggagctggtgcaattttttgac 666

                                                                       
Query: 561 tgtcatgtatattggttttgttgctgctcatacattcccagttctgtatgaaaggtatga 620
           |||||| ||||||||||||||||||||  | ||| |||||||||| |||||||| |||||
Sbjct: 667 tgtcatatatattggttttgttgctgcatacacactcccagttctctatgaaagatatga 726

                                                                       
Query: 621 ggatcaagttgatgactttgtgtacaagttccttggtcagatgcgaaatcaatatcagaa 680
            ||| | |||||  | ||| | ||||| |||||||  ||||| | |||||||||||| ||
Sbjct: 727 agatgaggttgacaattttttttacaacttccttgaacagatacaaaatcaatatcaaaa 786

                                           
Query: 681 gctggattctggcttgcttagcaaaatcccca 712
           | ||||| || |  |||| | |||||||||||
Sbjct: 787 gttggatgctagtgtgctgaacaaaatcccca 818