Miyakogusa Predicted Gene

Lj2g3v3070850.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3070850.3 Non Chatacterized Hit- tr|I1M721|I1M721_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42054
PE,83.75,0,coiled-coil,NULL; MATE EFFLUX FAMILY PROTEIN,NULL;
MULTIDRUG RESISTANCE PROTEIN,NULL; MatE,Multi ant,CUFF.39669.3
         (1320 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS318265 similar to UniRef100_A7Q9Z0 Cluster: Chromosom...    70   4e-11
gnl|LJGI|FS320482 similar to UniRef100_A7Q9Z0 Cluster: Chromosom...    70   4e-11

>gnl|LJGI|FS318265 similar to UniRef100_A7Q9Z0 Cluster: Chromosome chr8 scaffold_68,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_68, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 772

 Score = 69.9 bits (35), Expect = 4e-11
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                       
Query: 107 tgctgggaatggcaagtgctgtgcaaactgtgtgtgggcaagcatatggggccaaaaaat 166
           ||||||| |||||||||||  || ||||| | ||||||||||||||||||||||||| ||
Sbjct: 326 tgctgggcatggcaagtgcactggaaactctatgtgggcaagcatatggggccaaaagat 385

              
Query: 167 atg 169
           |||
Sbjct: 386 atg 388


>gnl|LJGI|FS320482 similar to UniRef100_A7Q9Z0 Cluster: Chromosome chr8 scaffold_68,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_68, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 735

 Score = 69.9 bits (35), Expect = 4e-11
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                       
Query: 107 tgctgggaatggcaagtgctgtgcaaactgtgtgtgggcaagcatatggggccaaaaaat 166
           ||||||| |||||||||||  || ||||| | ||||||||||||||||||||||||| ||
Sbjct: 389 tgctgggcatggcaagtgcactggaaactctatgtgggcaagcatatggggccaaaagat 448

              
Query: 167 atg 169
           |||
Sbjct: 449 atg 451