Miyakogusa Predicted Gene

Lj2g3v3070850.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3070850.1 Non Chatacterized Hit- tr|I1M721|I1M721_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42054 PE,78.57,0,MATE
EFFLUX FAMILY PROTEIN,NULL; MULTIDRUG RESISTANCE PROTEIN,NULL;
MatE,Multi antimicrobial extrusi,CUFF.39669.1
         (1128 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS318265 similar to UniRef100_A7Q9Z0 Cluster: Chromosom...    62   8e-09
gnl|LJGI|FS320482 similar to UniRef100_A7Q9Z0 Cluster: Chromosom...    62   8e-09

>gnl|LJGI|FS318265 similar to UniRef100_A7Q9Z0 Cluster: Chromosome chr8 scaffold_68,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_68, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 772

 Score = 61.9 bits (31), Expect = 8e-09
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 307 atggcaagtgctgtgcaaactgtgtgtgggcaagcatatggggccaaaaaatatg 361
           |||||||||||  || ||||| | ||||||||||||||||||||||||| |||||
Sbjct: 334 atggcaagtgcactggaaactctatgtgggcaagcatatggggccaaaagatatg 388


>gnl|LJGI|FS320482 similar to UniRef100_A7Q9Z0 Cluster: Chromosome chr8 scaffold_68,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_68, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 735

 Score = 61.9 bits (31), Expect = 8e-09
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 307 atggcaagtgctgtgcaaactgtgtgtgggcaagcatatggggccaaaaaatatg 361
           |||||||||||  || ||||| | ||||||||||||||||||||||||| |||||
Sbjct: 397 atggcaagtgcactggaaactctatgtgggcaagcatatggggccaaaagatatg 451