Miyakogusa Predicted Gene
- Lj2g3v3069800.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3069800.2 Non Chatacterized Hit- tr|I1JIZ7|I1JIZ7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27379
PE,79.7,0,IAA_ARF,Aux/IAA-ARF-dimerisation; CAD & PB1 domains,NULL;
AUX_IAA,AUX/IAA protein; FAMILY NOT NAMED,,CUFF.39663.2
(957 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63281 similar to UniRef100_A7PJQ8 Cluster: Chromosome... 805 0.0
gnl|LJGI|BW598325 weakly similar to UniRef100_A7PJQ8 Cluster: Ch... 341 5e-93
gnl|LJGI|BP043975 similar to UniRef100_A7PJQ8 Cluster: Chromosom... 167 2e-40
gnl|LJGI|BP055818 similar to UniRef100_A7HU31 Cluster: D-aminoac... 167 2e-40
gnl|LJGI|TC75592 similar to UniRef100_Q6L8U0 Cluster: Auxin resp... 72 7e-12
gnl|LJGI|AV779960 similar to UniRef100_Q6L8U0 Cluster: Auxin res... 70 3e-11
gnl|LJGI|TC70661 similar to UniRef100_Q6L8U0 Cluster: Auxin resp... 54 2e-06
>gnl|LJGI|TC63281 similar to UniRef100_A7PJQ8 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 781
Score = 805 bits (406), Expect = 0.0
Identities = 406/406 (100%)
Strand = Plus / Plus
Query: 552 taaggttcacaagtcagggtccttcgggaggtcactggacatttctaagttcagcagcta 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaggttcacaagtcagggtccttcgggaggtcactggacatttctaagttcagcagcta 60
Query: 612 tgatgagctgcgcagtgagctcgctcgcatgtttggccttgaaggccaactggaggaccc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgatgagctgcgcagtgagctcgctcgcatgtttggccttgaaggccaactggaggaccc 120
Query: 672 tatgactctgagatcaggctggcagcttgtatttgttgacagggagaatgacattcttct 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatgactctgagatcaggctggcagcttgtatttgttgacagggagaatgacattcttct 180
Query: 732 tcttggtgatgatccctggcaggagtttgtgaacaatgtctcgtacatcaagatactatc 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcttggtgatgatccctggcaggagtttgtgaacaatgtctcgtacatcaagatactatc 240
Query: 792 tccactagaagtgcaagaaatgggcagaagtgttgctacttctacttcttcccctggtca 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccactagaagtgcaagaaatgggcagaagtgttgctacttctacttcttcccctggtca 300
Query: 852 caaactttctaacaatggcaactcttgtgatgattatgcgagtcgacaagagttgagaag 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaactttctaacaatggcaactcttgtgatgattatgcgagtcgacaagagttgagaag 360
Query: 912 ttcgagaaatggcgtggcaccaatgggttcttttcattactaggac 957
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcgagaaatggcgtggcaccaatgggttcttttcattactaggac 406
>gnl|LJGI|BW598325 weakly similar to UniRef100_A7PJQ8 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 480
Score = 341 bits (172), Expect = 5e-93
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 386 atgattcattatcattgccgttttctgcttcaaactgtgatggtgttacgggcactgatt 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 atgattcattatcattgccgttttctgcttcaaactgtgatggtgttacgggcactgatt 64
Query: 446 tcccccttagttcaaacatcgcagcatcaagctgtgtggatgaatcaggcttcttgcagt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tcccccttagttcaaacatcgcagcatcaagctgtgtggatgaatcaggcttcttgcagt 124
Query: 506 cttctgaaaatgtagaccaagcaaatacaccaactggaacctttgttaaggt 557
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cttctgaaaatgtagaccaagcaaatacaccaactggaacctttgttaaggt 176
>gnl|LJGI|BP043975 similar to UniRef100_A7PJQ8 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 503
Score = 167 bits (84), Expect = 2e-40
Identities = 139/157 (88%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 753 ggagtttgtgaacaatg----tctcgtacatcaagatactatctccactagaagtgcaag 808
|||||||||||||| || |||| ||||||| ||||||||||||||||||||||||||
Sbjct: 385 ggagtttgtgaacagtgtcattctcatacatcaggatactatctccactagaagtgcaag 326
Query: 809 aaatgggcagaagtgttgctacttctacttcttcccctggtcacaaactttctaacaatg 868
||||| |||||||||||||||||||||||||||| || |||||||||||||||| | |
Sbjct: 325 aaatgcgcagaagtgttgctacttctacttcttctccaagtcacaaactttctaatgacg 266
Query: 869 gcaactcttgtgatgattatgcgagtcgacaagagtt 905
|||||||||| ||| |||||| ||||| |||||||||
Sbjct: 265 gcaactcttgcgataattatgtgagtccacaagagtt 229
Score = 165 bits (83), Expect = 6e-40
Identities = 165/191 (86%), Gaps = 6/191 (3%)
Strand = Plus / Minus
Query: 770 tctcgtacatcaagatactatctccactagaagtgcaagaaatgggcagaagtgttgcta 829
|||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 364 tctcatacatcaggatactatctccactagaagtgcaagaaatgcgcagaagtgttgcta 305
Query: 830 cttctacttcttcccctggtcacaaactttctaacaatggcaactcttgtgatgattatg 889
||||||||||||| || |||||||||||||||| | ||||||||||| ||| ||||||
Sbjct: 304 cttctacttcttctccaagtcacaaactttctaatgacggcaactcttgcgataattatg 245
Query: 890 cgagtcgacaagagtt----gagaagttcgagaaatggcgtggcaccaatgggttctttt 945
||||| ||||||||| | || || |||||| ||||||||||||||||||||
Sbjct: 244 tgagtccacaagagtttgacggcaactttct--aatggcatggcaccaatgggttctttt 187
Query: 946 cattactagga 956
|||||||||||
Sbjct: 186 cattactagga 176
>gnl|LJGI|BP055818 similar to UniRef100_A7HU31 Cluster: D-aminoacylase domain protein;
n=1; Parvibaculum lavamentivorans DS-1|Rep:
D-aminoacylase domain protein - Parvibaculum
lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966),
partial (3%)
Length = 535
Score = 167 bits (84), Expect = 2e-40
Identities = 139/157 (88%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 753 ggagtttgtgaacaatg----tctcgtacatcaagatactatctccactagaagtgcaag 808
|||||||||||||| || |||| ||||||| ||||||||||||||||||||||||||
Sbjct: 441 ggagtttgtgaacagtgtcattctcatacatcaggatactatctccactagaagtgcaag 382
Query: 809 aaatgggcagaagtgttgctacttctacttcttcccctggtcacaaactttctaacaatg 868
||||| |||||||||||||||||||||||||||| || |||||||||||||||| | |
Sbjct: 381 aaatgcgcagaagtgttgctacttctacttcttctccaagtcacaaactttctaatgacg 322
Query: 869 gcaactcttgtgatgattatgcgagtcgacaagagtt 905
|||||||||| ||| |||||| ||||| |||||||||
Sbjct: 321 gcaactcttgcgataattatgtgagtccacaagagtt 285
Score = 159 bits (80), Expect = 4e-38
Identities = 164/191 (85%), Gaps = 6/191 (3%)
Strand = Plus / Minus
Query: 770 tctcgtacatcaagatactatctccactagaagtgcaagaaatgggcagaagtgttgcta 829
|||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 420 tctcatacatcaggatactatctccactagaagtgcaagaaatgcgcagaagtgttgcta 361
Query: 830 cttctacttcttcccctggtcacaaactttctaacaatggcaactcttgtgatgattatg 889
||||||||||||| || |||||||||||||||| | ||||||||||| ||| ||||||
Sbjct: 360 cttctacttcttctccaagtcacaaactttctaatgacggcaactcttgcgataattatg 301
Query: 890 cgagtcgacaagagtt----gagaagttcgagaaatggcgtggcaccaatgggttctttt 945
||||| ||||||||| | || || |||||| ||||||| ||||||||||||
Sbjct: 300 tgagtccacaagagtttgacggcaactttct--aatggcatggcaccnatgggttctttt 243
Query: 946 cattactagga 956
|||||||||||
Sbjct: 242 cattactagga 232
>gnl|LJGI|TC75592 similar to UniRef100_Q6L8U0 Cluster: Auxin response factor 4; n=1;
Cucumis sativus|Rep: Auxin response factor 4 - Cucumis
sativus (Cucumber), partial (13%)
Length = 633
Score = 71.9 bits (36), Expect = 7e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 680 tgagatcaggctggcagcttgtatttgttgacagggagaatgacattcttcttcttggtg 739
||||||||||||||||||||||||| |||||| | |||| |||| ||||||| || ||||
Sbjct: 45 tgagatcaggctggcagcttgtattcgttgaccgagagagtgacgttcttctcctcggtg 104
Query: 740 atgatccctggc 751
||| |||||||
Sbjct: 105 atggcccctggc 116
>gnl|LJGI|AV779960 similar to UniRef100_Q6L8U0 Cluster: Auxin response factor 4; n=1;
Cucumis sativus|Rep: Auxin response factor 4 - Cucumis
sativus (Cucumber), partial (11%)
Length = 497
Score = 69.9 bits (35), Expect = 3e-11
Identities = 89/107 (83%)
Strand = Plus / Minus
Query: 682 agatcaggctggcagcttgtatttgttgacagggagaatgacattcttcttcttggtgat 741
||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||||
Sbjct: 495 agatcaggctggcagcttgtattcgttgaccaagagaatgatgttcttgttcttggtgat 436
Query: 742 gatccctggcaggagtttgtgaacaatgtctcgtacatcaagatact 788
| || |||| ||| ||||| || | |||| || ||||||||||||
Sbjct: 435 ggcccttggccggaatttgtaaatagtgtcgggtgcatcaagatact 389
>gnl|LJGI|TC70661 similar to UniRef100_Q6L8U0 Cluster: Auxin response factor 4; n=1;
Cucumis sativus|Rep: Auxin response factor 4 - Cucumis
sativus (Cucumber), partial (11%)
Length = 534
Score = 54.0 bits (27), Expect = 2e-06
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 690 ctggcagcttgtatttgttgacagggagaatgacattcttcttcttggtgatgatccctg 749
||||||||||||||| |||||| | |||| |||| ||||||| || ||||||| |||||
Sbjct: 1 ctggcagcttgtattcgttgaccgagagagtgacgttcttctcctcggtgatggcccctg 60
Query: 750 gcaggagtttgtgaacaatgtctcgtacatcaagatact 788
|| ||| || || || | ||| | || ||||||||||||
Sbjct: 61 gccggaattcgtaaatagtgtatggtgcatcaagatact 99