Miyakogusa Predicted Gene

Lj2g3v3059770.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3059770.1 CUFF.39701.1
         (346 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80402 similar to UniRef100_A7PJQ5 Cluster: Chromosome...   583   e-166
gnl|LJGI|TC80258 similar to UniRef100_A7PJQ5 Cluster: Chromosome...   521   e-148

>gnl|LJGI|TC80402 similar to UniRef100_A7PJQ5 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 482

 Score =  583 bits (294), Expect = e-166
 Identities = 300/302 (99%)
 Strand = Plus / Minus

                                                                       
Query: 45  ctccaacactattgtgattagagcaaccagcaacagcccttgcaaggataggaagagatt 104
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctccaacactattgtgattagagcaaccagcaacagcccttgcaaggataggaagagatt 300

                                                                       
Query: 105 gaagctgagaatgagaaaaaggaatcataggcatgcaaatgcagacagtggaggtggtcc 164
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gaagctgagaatgagaaaaaggaatcataggcatgcaaatgcagacagtggaggtggtcc 240

                                                                       
Query: 165 caccatccaaacccaacaagacaccaccagtttcaccatcagaaacaggcatgatgtcat 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 caccatccaaacccaacaagacaccaccagtttcaccatcagaaacaggcatgatgtcat 180

                                                                       
Query: 225 cctcaaaatcccagatttcaccattcctgtacctcttcatctcagcatcaatcagcaact 284
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 cctcaaaatcccagatttcaccattcctgtacctcttcatctcagcatcaatcagcaact 120

                                                                       
Query: 285 gctccttctcctgctcctgctccttctcctgctctggcgtcatcacaatttgacaatttg 344
           |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 119 gctccttctccttctcctgctcctcctcctgctctggcgtcatcacaatttgacaatttg 60

             
Query: 345 aa 346
           ||
Sbjct: 59  aa 58


>gnl|LJGI|TC80258 similar to UniRef100_A7PJQ5 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (91%)
          Length = 1614

 Score =  521 bits (263), Expect = e-148
 Identities = 272/275 (98%)
 Strand = Plus / Minus

                                                                       
Query: 45  ctccaacactattgtgattagagcaaccagcaacagcccttgcaaggataggaagagatt 104
           ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||
Sbjct: 443 ctccaacactattgtgattagagccccccgcaacagcccttgcaaggataggaagagatt 384

                                                                       
Query: 105 gaagctgagaatgagaaaaaggaatcataggcatgcaaatgcagacagtggaggtggtcc 164
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaagctgagaatgagaaaaaggaatcataggcatgcaaatgcagacagtggaggtggtcc 324

                                                                       
Query: 165 caccatccaaacccaacaagacaccaccagtttcaccatcagaaacaggcatgatgtcat 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caccatccaaacccaacaagacaccaccagtttcaccatcagaaacaggcatgatgtcat 264

                                                                       
Query: 225 cctcaaaatcccagatttcaccattcctgtacctcttcatctcagcatcaatcagcaact 284
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cctcaaaatcccagatttcaccattcctgtacctcttcatctcagcatcaatcagcaact 204

                                              
Query: 285 gctccttctcctgctcctgctccttctcctgctct 319
           |||||||||||||||||||||||||||||||||||
Sbjct: 203 gctccttctcctgctcctgctccttctcctgctct 169