Miyakogusa Predicted Gene

Lj2g3v3055290.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3055290.2 tr|Q9SGP0|Q9SGP0_ARATH F3M18.14 OS=Arabidopsis
thaliana GN=At1g28420 PE=3 SV=1,30.28,4e-17,Homeobox,Homeodomain; no
description,Homeodomain-like; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NU,CUFF.39636.2
         (1488 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV406955 similar to UniRef100_A7PQZ6 Cluster: Chromosom...   842   0.0  

>gnl|LJGI|AV406955 similar to UniRef100_A7PQZ6 Cluster: Chromosome chr6 scaffold_25,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_25, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (20%)
          Length = 437

 Score =  842 bits (425), Expect = 0.0
 Identities = 434/437 (99%)
 Strand = Plus / Plus

                                                                       
Query: 353 atcctaaagaggctgagagccatggcatctacaatcaagatatttcagttgcagatatga 412
           ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atcctaaagaggctgacccccatggcatctacaatcaagatatttcagttgcagatatga 60

                                                                       
Query: 413 cctatggacgtagggattattatccagaaaatggtagaggaatggatgacacatcatctg 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cctatggacgtagggattattatccagaaaatggtagaggaatggatgacacatcatctg 120

                                                                       
Query: 473 agagcagctcatttctgcaagaacgtttgtattcccagggccaggatccctatgatatgg 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagcagctcatttctgcaagaacgtttgtattcccagggccaggatccctatgatatgg 180

                                                                       
Query: 533 agccttctagacatcgaacacctagcggatctcttccacccctaaatcccaagagtgcaa 592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agccttctagacatcgaacacctagcggatctcttccacccctaaatcccaagagtgcaa 240

                                                                       
Query: 593 ctaaaatgggatataaaccatcaggatatttgaaagtgaagggcgagatagaacatgctg 652
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctaaaatgggatataaaccatcaggatatttgaaagtgaagggcgagatagaacatgctg 300

                                                                       
Query: 653 ctataactgctgttaagaagcaactaggaaggcattatctggaagatggtcctctgcttg 712
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctataactgctgttaagaagcaactaggaaggcattatctggaagatggtcctctgcttg 360

                                                                       
Query: 713 gtgtagaatttgatccacttcctccaggggcatttgaattccaaactgaatatccagttc 772
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgtagaatttgatccacttcctccaggggcatttgaattccaaactgaatatccagttc 420

                            
Query: 773 atgaagcataccatgtt 789
           |||||||||||||||||
Sbjct: 421 atgaagcataccatgtt 437