Miyakogusa Predicted Gene
- Lj2g3v3034050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3034050.1 tr|B9HW33|B9HW33_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_880495
PE=3,80.4,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
(Trans)glycosidases,Glycoside hydrolase,
,NODE_26988_length_1925_cov_32.105453.path2.1
(1506 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV413823 similar to UniRef100_A7P3T4 Cluster: Chromosom... 757 0.0
gnl|LJGI|AV768339 similar to UniRef100_A7P3T4 Cluster: Chromosom... 729 0.0
gnl|LJGI|BP057569 similar to UniRef100_Q94EN5 Cluster: Beta-1,3-... 129 5e-29
gnl|LJGI|TC74872 similar to UniRef100_A2Q370 Cluster: Glycoside ... 78 2e-13
gnl|LJGI|TC76405 weakly similar to UniRef100_A2Q370 Cluster: Gly... 70 4e-11
>gnl|LJGI|AV413823 similar to UniRef100_A7P3T4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 382
Score = 757 bits (382), Expect = 0.0
Identities = 382/382 (100%)
Strand = Plus / Plus
Query: 707 tgcattacactaatgtttttgatgcaattgttgatgctgcttattttgcaatgtctgact 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcattacactaatgtttttgatgcaattgttgatgctgcttattttgcaatgtctgact 60
Query: 767 tgaacttcaccaatatccctgttctggtcactgaatcaggatggccctcaaaaggcgact 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaacttcaccaatatccctgttctggtcactgaatcaggatggccctcaaaaggcgact 120
Query: 827 catctgagccggatgcaaccattgataatgctaacacttacaacagtaacttgatcagac 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catctgagccggatgcaaccattgataatgctaacacttacaacagtaacttgatcagac 180
Query: 887 atgttcttaacaatacaggaactccgaaacacccgggaattgcagttagtacatacattt 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgttcttaacaatacaggaactccgaaacacccgggaattgcagttagtacatacattt 240
Query: 947 atgagctttacaatgaagacttgagatcaggtccagtctcagaaaagaactgggggctat 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgagctttacaatgaagacttgagatcaggtccagtctcagaaaagaactgggggctat 300
Query: 1007 tttttgctaatggaggaccagtgtataccttacacttaactggtgttggtactatatttg 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttttgctaatggaggaccagtgtataccttacacttaactggtgttggtactatatttg 360
Query: 1067 caaatgatacgacaaaccaaac 1088
||||||||||||||||||||||
Sbjct: 361 caaatgatacgacaaaccaaac 382
>gnl|LJGI|AV768339 similar to UniRef100_A7P3T4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (19%)
Length = 576
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Minus
Query: 1139 ttgattgggcttgtggaccagggaaggttgattgttcccctttgctgcagggtcaaccat 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttgattgggcttgtggaccagggaaggttgattgttcccctttgctgcagggtcaaccat 517
Query: 1199 gtcatgaaccagataatgtagttgcgcatgctacatacgctttcaatgcttattatcaga 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gtcatgaaccagataatgtagttgcgcatgctacatacgctttcaatgcttattatcaga 457
Query: 1259 agatggctaagtctcctgggacctgcgatttcaaaggggttgccgctatcacttccacag 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agatggctaagtctcctgggacctgcgatttcaaaggggttgccgctatcacttccacag 397
Query: 1319 acccaagtcatggttcttgtatatttccaggaagtcatggtaaaaatggcaccagcataa 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 acccaagtcatggttcttgtatatttccaggaagtcatggtaaaaatggcaccagcataa 337
Query: 1379 atggcacttcacttgccccatctaattctacaagttcaggctgtttatcgcaatactact 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atggcacttcacttgccccatctaattctacaagttcaggctgtttatcgcaatactact 277
Query: 1439 acagtaggggatctttcacaagctctgtgattctagttgttttacttttcagtgcagctg 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 acagtaggggatctttcacaagctctgtgattctagttgttttacttttcagtgcagctg 217
Query: 1499 tcatataa 1506
||||||||
Sbjct: 216 tcatataa 209
>gnl|LJGI|BP057569 similar to UniRef100_Q94EN5 Cluster: Beta-1,3-glucanase; n=1;
Camellia sinensis|Rep: Beta-1,3-glucanase - Camellia
sinensis (Tea), partial (11%)
Length = 587
Score = 129 bits (65), Expect = 5e-29
Identities = 137/161 (85%)
Strand = Plus / Minus
Query: 1225 catgctacatacgctttcaatgcttattatcagaagatggctaagtctcctgggacctgc 1284
|||||||| || ||||||||||| ||||||||| ||||| ||| ||| |||| || ||
Sbjct: 587 catgctacgtatgctttcaatgcgtattatcagctgatggataaatcttctggtacttgt 528
Query: 1285 gatttcaaaggggttgccgctatcacttccacagacccaagtcatggttcttgtatattt 1344
|||||||||||||||||| || |||| ||||| |||||||||||||||| |||| ||||
Sbjct: 527 gatttcaaaggggttgcctctgtcaccaccacaaacccaagtcatggttcctgtacattt 468
Query: 1345 ccaggaagtcatggtaaaaatggcaccagcataaatggcac 1385
|||||||| ||||||||||| |||||||| ||||||||
Sbjct: 467 tcaggaagtggtggtaaaaatgttaccagcattaatggcac 427
>gnl|LJGI|TC74872 similar to UniRef100_A2Q370 Cluster: Glycoside hydrolase, family 17;
Virulence factor, pectin lyase fold; X8; n=1; Medicago
truncatula|Rep: Glycoside hydrolase, family 17; Virulence
factor, pectin lyase fold; X8 - Medicago truncatula
(Barrel medic), partial (21%)
Length = 521
Score = 77.8 bits (39), Expect = 2e-13
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 1321 ccaagtcatggttcttgtatatttccaggaagtcatggtaaaaatggcacc 1371
||||||||||||||||||| |||||||||||||| ||| ||||||||||||
Sbjct: 131 ccaagtcatggttcttgtaaatttccaggaagtcttggcaaaaatggcacc 181
>gnl|LJGI|TC76405 weakly similar to UniRef100_A2Q370 Cluster: Glycoside hydrolase,
family 17; Virulence factor, pectin lyase fold; X8; n=1;
Medicago truncatula|Rep: Glycoside hydrolase, family 17;
Virulence factor, pectin lyase fold; X8 - Medicago
truncatula (Barrel medic), partial (13%)
Length = 474
Score = 69.9 bits (35), Expect = 4e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1321 ccaagtcatggttcttgtatatttccaggaagtcatggtaaaaatggcacc 1371
|||||||||||||| ||||||||||||||||||| ||| |||||||||||
Sbjct: 103 ccaagtcatggttcctgtatatttccaggaagtcttgggcaaaatggcacc 153