Miyakogusa Predicted Gene
- Lj2g3v3034040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3034040.1 tr|B9HJE6|B9HJE6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_766170 PE=4
SV=1,63.38,2e-18,4FE4S_FER_1,4Fe-4S ferredoxin, iron-sulphur binding,
conserved site; PUTATIVE UNCHARACTERIZED
PROTEI,NODE_66079_length_1171_cov_62.030743.path2.1
(837 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59531 weakly similar to UniRef100_A7P3T3 Cluster: Chr... 1659 0.0
gnl|LJGI|GO024790 weakly similar to UniRef100_A7P3T3 Cluster: Ch... 1166 0.0
>gnl|LJGI|TC59531 weakly similar to UniRef100_A7P3T3 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (59%)
Length = 1130
Score = 1659 bits (837), Expect = 0.0
Identities = 837/837 (100%)
Strand = Plus / Plus
Query: 1 atgtctcaggtttgcaaagcactaagggatgcagttaacaatgatgtgttgccatggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 atgtctcaggtttgcaaagcactaagggatgcagttaacaatgatgtgttgccatggctg 262
Query: 61 aatgttattgttgaaaggcctctgagttcaaggctctctgatgagattctagtgaaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatgttattgttgaaaggcctctgagttcaaggctctctgatgagattctagtgaaaatc 322
Query: 121 acttccaaggccaatggaaggctcaaaactctggctttgatgaactgcacccacatcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acttccaaggccaatggaaggctcaaaactctggctttgatgaactgcacccacatcact 382
Query: 181 gacaaggggctccaaagggtcgttgaacaaaaccccctcatcaacaagctgcatatacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gacaaggggctccaaagggtcgttgaacaaaaccccctcatcaacaagctgcatatacca 442
Query: 241 gcatgcaccggcataaccgctgaaggagttacaagagcagtgcaaacattgtgccaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gcatgcaccggcataaccgctgaaggagttacaagagcagtgcaaacattgtgccaaaga 502
Query: 301 agcaactgcttaagcacattacgcataaacggcatctacaacctacagaaggagcatcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agcaactgcttaagcacattacgcataaacggcatctacaacctacagaaggagcatcta 562
Query: 361 gacatgcttgccatgaacctcagaaagaacgttccattagaggagcagcaaatgcagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gacatgcttgccatgaacctcagaaagaacgttccattagaggagcagcaaatgcagaag 622
Query: 421 cctaactactatcataaacgcggaagctttacagtgtttagccgcgaagaaaaccagagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cctaactactatcataaacgcggaagctttacagtgtttagccgcgaagaaaaccagagg 682
Query: 481 attattgatttggagacatgtcccaagtgctttgaggtgacgatggtctatgactgtcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 attattgatttggagacatgtcccaagtgctttgaggtgacgatggtctatgactgtcca 742
Query: 541 aaagtggaatgcatgaagagggaaaagccccaagttcaatgtaggggatgcaaattttgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aaagtggaatgcatgaagagggaaaagccccaagttcaatgtaggggatgcaaattttgt 802
Query: 601 attccaaggtgtgaaaactgtggtggatgtgttggatctgaagaagaggaagaagctgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 attccaaggtgtgaaaactgtggtggatgtgttggatctgaagaagaggaagaagctgca 862
Query: 661 tgtgcagatatcttgtgccttgaatgttggttgcagcttcccaagtgtaatttctgtaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 tgtgcagatatcttgtgccttgaatgttggttgcagcttcccaagtgtaatttctgtaat 922
Query: 721 aaaccatattgtaaacaacatgaaaattggtggtgctcttccttagaccctatattcctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 aaaccatattgtaaacaacatgaaaattggtggtgctcttccttagaccctatattcctc 982
Query: 781 tgcagagtttgtgatgaacattctcatggatatacatacactgatgttctatagtga 837
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 tgcagagtttgtgatgaacattctcatggatatacatacactgatgttctatagtga 1039
>gnl|LJGI|GO024790 weakly similar to UniRef100_A7P3T3 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (34%)
Length = 671
Score = 1166 bits (588), Expect = 0.0
Identities = 588/588 (100%)
Strand = Plus / Plus
Query: 143 tcaaaactctggctttgatgaactgcacccacatcactgacaaggggctccaaagggtcg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tcaaaactctggctttgatgaactgcacccacatcactgacaaggggctccaaagggtcg 143
Query: 203 ttgaacaaaaccccctcatcaacaagctgcatataccagcatgcaccggcataaccgctg 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ttgaacaaaaccccctcatcaacaagctgcatataccagcatgcaccggcataaccgctg 203
Query: 263 aaggagttacaagagcagtgcaaacattgtgccaaagaagcaactgcttaagcacattac 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aaggagttacaagagcagtgcaaacattgtgccaaagaagcaactgcttaagcacattac 263
Query: 323 gcataaacggcatctacaacctacagaaggagcatctagacatgcttgccatgaacctca 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcataaacggcatctacaacctacagaaggagcatctagacatgcttgccatgaacctca 323
Query: 383 gaaagaacgttccattagaggagcagcaaatgcagaagcctaactactatcataaacgcg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaaagaacgttccattagaggagcagcaaatgcagaagcctaactactatcataaacgcg 383
Query: 443 gaagctttacagtgtttagccgcgaagaaaaccagaggattattgatttggagacatgtc 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaagctttacagtgtttagccgcgaagaaaaccagaggattattgatttggagacatgtc 443
Query: 503 ccaagtgctttgaggtgacgatggtctatgactgtccaaaagtggaatgcatgaagaggg 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccaagtgctttgaggtgacgatggtctatgactgtccaaaagtggaatgcatgaagaggg 503
Query: 563 aaaagccccaagttcaatgtaggggatgcaaattttgtattccaaggtgtgaaaactgtg 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaagccccaagttcaatgtaggggatgcaaattttgtattccaaggtgtgaaaactgtg 563
Query: 623 gtggatgtgttggatctgaagaagaggaagaagctgcatgtgcagatatcttgtgccttg 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtggatgtgttggatctgaagaagaggaagaagctgcatgtgcagatatcttgtgccttg 623
Query: 683 aatgttggttgcagcttcccaagtgtaatttctgtaataaaccatatt 730
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aatgttggttgcagcttcccaagtgtaatttctgtaataaaccatatt 671