Miyakogusa Predicted Gene
- Lj2g3v3034030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3034030.1 tr|A9S6P3|A9S6P3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_124931,46.99,0.000000000000001,no description,Dynein
light chain, type 1/2; DLC,Dynein light chain, type 1/2;
Dynein_light,Dynein l,NODE_55810_length_989_cov_44.591507.path2.1
(405 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68141 similar to UniRef100_A7P3T2 Cluster: Chromosome... 803 0.0
gnl|LJGI|BW594422 similar to UniRef100_A7P3T2 Cluster: Chromosom... 424 e-118
gnl|LJGI|TC72108 homologue to UniRef100_A7P3T2 Cluster: Chromoso... 349 8e-96
gnl|LJGI|BW596802 homologue to UniRef100_A7P3T2 Cluster: Chromos... 325 1e-88
>gnl|LJGI|TC68141 similar to UniRef100_A7P3T2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (93%)
Length = 1445
Score = 803 bits (405), Expect = 0.0
Identities = 405/405 (100%)
Strand = Plus / Plus
Query: 1 atggaaggtgcagaggaggagctagagagaagaagcaggtttctgaaaagcttgatacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 atggaaggtgcagaggaggagctagagagaagaagcaggtttctgaaaagcttgatacag 745
Query: 61 aagaagaaagtctcagagaaacaagagcagcatgaccacatccaaaacaacaatgttcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aagaagaaagtctcagagaaacaagagcagcatgaccacatccaaaacaacaatgttcgg 805
Query: 121 gtcagggcttgtgacatgcctctccttttgcagaaccgtgccttttgttgcgctcgtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gtcagggcttgtgacatgcctctccttttgcagaaccgtgccttttgttgcgctcgtgat 865
Query: 181 cttctggattctatgccagcaaataagcttgacaccaaacgcctggccctgacccttaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 cttctggattctatgccagcaaataagcttgacaccaaacgcctggccctgacccttaag 925
Query: 241 aaggaatttgattcatcctatggtccagcttggcactgcattgtgggatctagctttggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 aaggaatttgattcatcctatggtccagcttggcactgcattgtgggatctagctttggc 985
Query: 301 tcatatgtgactcattctcttggtggattcttgtatttttccattgacaaggtctacatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 tcatatgtgactcattctcttggtggattcttgtatttttccattgacaaggtctacatc 1045
Query: 361 cttctcttcaagacagctgttgaaccattagaccatccataactt 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 cttctcttcaagacagctgttgaaccattagaccatccataactt 1090
>gnl|LJGI|BW594422 similar to UniRef100_A7P3T2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 480
Score = 424 bits (214), Expect = e-118
Identities = 214/214 (100%)
Strand = Plus / Plus
Query: 1 atggaaggtgcagaggaggagctagagagaagaagcaggtttctgaaaagcttgatacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atggaaggtgcagaggaggagctagagagaagaagcaggtttctgaaaagcttgatacag 326
Query: 61 aagaagaaagtctcagagaaacaagagcagcatgaccacatccaaaacaacaatgttcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aagaagaaagtctcagagaaacaagagcagcatgaccacatccaaaacaacaatgttcgg 386
Query: 121 gtcagggcttgtgacatgcctctccttttgcagaaccgtgccttttgttgcgctcgtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtcagggcttgtgacatgcctctccttttgcagaaccgtgccttttgttgcgctcgtgat 446
Query: 181 cttctggattctatgccagcaaataagcttgaca 214
||||||||||||||||||||||||||||||||||
Sbjct: 447 cttctggattctatgccagcaaataagcttgaca 480
>gnl|LJGI|TC72108 homologue to UniRef100_A7P3T2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 489
Score = 349 bits (176), Expect = 8e-96
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 230 tgacccttaagaaggaatttgattcatcctatggtccagcttggcactgcattgtgggat 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 tgacccttaagaaggaatttgattcatcctatggtccagcttggcactgcattgtgggat 116
Query: 290 ctagctttggctcatatgtgactcattctcttggtggattcttgtatttttccattgaca 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ctagctttggctcatatgtgactcattctcttggtggattcttgtatttttccattgaca 176
Query: 350 aggtctacatccttctcttcaagacagctgttgaaccattagaccatccataactt 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 aggtctacatccttctcttcaagacagctgttgaaccattagaccatccataactt 232
Score = 107 bits (54), Expect = 5e-23
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 40 tttctgaaaagcttgatacagaagaagaaagtctcagagaaacaagagcagcatgacc 97
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tttcggaaaagcttgatacagaagaagaaagtctcagagaaacaagagcagcatgacc 61
>gnl|LJGI|BW596802 homologue to UniRef100_A7P3T2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 533
Score = 325 bits (164), Expect = 1e-88
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 242 aggaatttgattcatcctatggtccagcttggcactgcattgtgggatctagctttggct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 aggaatttgattcatcctatggtccagcttggcactgcattgtgggatctagctttggct 145
Query: 302 catatgtgactcattctcttggtggattcttgtatttttccattgacaaggtctacatcc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 catatgtgactcattctcttggtggattcttgtatttttccattgacaaggtctacatcc 205
Query: 362 ttctcttcaagacagctgttgaaccattagaccatccataactt 405
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttctcttcaagacagctgttgaaccattagaccatccataactt 249