Miyakogusa Predicted Gene
- Lj2g3v3022970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3022970.1 tr|E9KID2|E9KID2_MEDTR Root determined nodulation
1 OS=Medicago truncatula GN=RDN1 PE=2 SV=1,86.7,0,seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.39629.1
(1086 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS359103 homologue to UniRef100_A7PR07 Cluster: Chromos... 876 0.0
gnl|LJGI|TC68975 similar to UniRef100_A7Q5E7 Cluster: Chromosome... 147 2e-34
gnl|LJGI|TC75618 similar to UniRef100_A7P603 Cluster: Chromosome... 86 5e-16
>gnl|LJGI|FS359103 homologue to UniRef100_A7PR07 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 729
Score = 876 bits (442), Expect = 0.0
Identities = 442/442 (100%)
Strand = Plus / Minus
Query: 645 tgtaatcattcagaagtctttgattgaggaaatagctcccacctgggtgaatgtttcatt 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tgtaatcattcagaagtctttgattgaggaaatagctcccacctgggtgaatgtttcatt 670
Query: 705 gagaatgaaagatgatccggagacagataaagcttttggatgggtgcttgaaatgtatgc 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gagaatgaaagatgatccggagacagataaagcttttggatgggtgcttgaaatgtatgc 610
Query: 765 ttatgctgtggcatctgcattgcatggtgtaaagcatattcttcgaaaagactttatgct 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ttatgctgtggcatctgcattgcatggtgtaaagcatattcttcgaaaagactttatgct 550
Query: 825 gcagccaccttgggacagacatgtagggaagacattcatcatccattatacatatggatg 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gcagccaccttgggacagacatgtagggaagacattcatcatccattatacatatggatg 490
Query: 885 tgactacaatttgaagggggaactgacatatgggaagattggagaatggcgtttcgacaa 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgactacaatttgaagggggaactgacatatgggaagattggagaatggcgtttcgacaa 430
Query: 945 gagatcatatcttatgggtcctccacccaaaaacctttccttaccacctcctggagttcc 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gagatcatatcttatgggtcctccacccaaaaacctttccttaccacctcctggagttcc 370
Query: 1005 tgaaagtgtggtgcggcttgtaaagatggtcaatgaggccactgcaaacatacctgaatg 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgaaagtgtggtgcggcttgtaaagatggtcaatgaggccactgcaaacatacctgaatg 310
Query: 1065 ggattcattaaatagaagctga 1086
||||||||||||||||||||||
Sbjct: 309 ggattcattaaatagaagctga 288
>gnl|LJGI|TC68975 similar to UniRef100_A7Q5E7 Cluster: Chromosome undetermined
scaffold_53, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_53, whole
genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 1571
Score = 147 bits (74), Expect = 2e-34
Identities = 398/506 (78%)
Strand = Plus / Plus
Query: 334 ttgatggatgaaattccaacttttgtggttgatcctcttcctgagggcttggaccggggt 393
||||||||||||||||| ||| ||||||| ||||||||||| | || ||||||||||
Sbjct: 599 ttgatggatgaaattcctactgttgtggtggatcctcttccagcaggtctggaccgggga 658
Query: 394 tatattgtcctaaatagaccatgggcttttgttcagtggttggagaaggcagatattgaa 453
|| ||||| || |||||||||||||| |||||||| ||| |||| || || | || |||
Sbjct: 659 tacattgttctgaatagaccatgggcctttgttcaatggctggaaaaagctaaaatcgaa 718
Query: 454 gaagaatatattctgatggcagaacctgaccacatatttgtaaatcctttgcctaatttg 513
||||| ||| || | |||||||| ||||| ||| |||||||| ||| | || ||| ||
Sbjct: 719 gaagagtatgttttaatggcagagcctgatcacgtatttgtacgccctcttcccaatctg 778
Query: 514 gcttctagaacccaaccagcagggtatccatttttctacataaaacctgctgaaaatgaa 573
|||| | || | ||||| | | ||| ||||| ||||| | |||| | | ||||||
Sbjct: 779 gcttatggagaaaatccagctgcttttccgtttttttacattaggcctgatcagaatgaa 838
Query: 574 aaaataattagaaagttctatcctaaggacaagggtcccgttactgacgttgatccgatt 633
||||| || || |||| |||||| |||| || || || || || | |||||||||||
Sbjct: 839 aaaatcataaggaagtattatcctgaggagaaaggaccagtaacaaatattgatccgatt 898
Query: 634 ggcaattctcctgtaatcattcagaagtctttgattgaggaaatagctcccacctgggtg 693
||||||||||||||||| || | | | | |||||| | || ||||| || ||| ||
Sbjct: 899 ggcaattctcctgtaattatcaaaacggatgtgattgctaagattgctccgacatggatg 958
Query: 694 aatgtttcattgagaatgaaagatgatccggagacagataaagcttttggatgggtgctt 753
|||||||| |||| |||||||| || || ||||| ||||||||||| |||||||| ||
Sbjct: 959 aatgtttctttgaagatgaaagaggacccagagaccgataaagctttcggatgggtacta 1018
Query: 754 gaaatgtatgcttatgctgtggcatctgcattgcatggtgtaaagcatattcttcgaaaa 813
||||||||||||||||| | |||||||| |||||||||| | ||||||||| || |||
Sbjct: 1019 gaaatgtatgcttatgcgatagcatctgccctgcatggtgtgaggcatattctgcggaaa 1078
Query: 814 gactttatgctgcagccaccttggga 839
||||| ||||| ||||| || |||||
Sbjct: 1079 gacttcatgctacagcccccatggga 1104
>gnl|LJGI|TC75618 similar to UniRef100_A7P603 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1453
Score = 85.7 bits (43), Expect = 5e-16
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 679 gctcccacctgggtgaatgtttcattgagaatgaaagatgatccggagacagataaagct 738
|||||||| ||| |||||||||| || |||||| | ||||| || || ||||||||
Sbjct: 851 gctcccacttggatgaatgtttccctggcaatgaagaaggatcctgaaactgataaagcc 910
Query: 739 tttggatgggtgcttgaaatgtatgcttatgctgt 773
|||||||||||||||||||||||||||||||||||
Sbjct: 911 tttggatgggtgcttgaaatgtatgcttatgctgt 945