Miyakogusa Predicted Gene

Lj2g3v3022810.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3022810.1 Non Chatacterized Hit- tr|I3SB95|I3SB95_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,RRM_1,RNA
recognition motif domain; RRM,RNA recognition motif domain; SUBFAMILY
NOT NAMED,NULL; PRE-,CUFF.39612.1
         (380 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65177 similar to UniRef100_A9SBS3 Cluster: Predicted ...   753   0.0  
gnl|LJGI|TC63377 similar to UniRef100_A9SBS3 Cluster: Predicted ...   753   0.0  

>gnl|LJGI|TC65177 similar to UniRef100_A9SBS3 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (98%)
          Length = 650

 Score =  753 bits (380), Expect = 0.0
 Identities = 380/380 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgacaatcagcctccggaagggaaacacacggttgccaccggaagtcaaccgcgtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  atggcgacaatcagcctccggaagggaaacacacggttgccaccggaagtcaaccgcgtc 121

                                                                       
Query: 61  ctctacgtccgaaacctcccattcaacatcacaagcgaggagatgtacgatatcttcggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctctacgtccgaaacctcccattcaacatcacaagcgaggagatgtacgatatcttcggc 181

                                                                       
Query: 121 aagtacggcgcaatccgccagatccgaatcggaaccaccaaggacacgcgcggcaccgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aagtacggcgcaatccgccagatccgaatcggaaccaccaaggacacgcgcggcaccgcc 241

                                                                       
Query: 181 ttcgtcgtgtatgaggacatctacgacgccaaaaccgccgtcgatcacctctccggcttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttcgtcgtgtatgaggacatctacgacgccaaaaccgccgtcgatcacctctccggcttc 301

                                                                       
Query: 241 aacgtcgccaaccgctacctcatcgtgttgtattaccagcaggcgaagatgagcaagaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aacgtcgccaaccgctacctcatcgtgttgtattaccagcaggcgaagatgagcaagaag 361

                                                                       
Query: 301 tttgaccagaagaagaaggaggatgagatcgcgaggatgcaggagaagtatggcgtttcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tttgaccagaagaagaaggaggatgagatcgcgaggatgcaggagaagtatggcgtttcc 421

                               
Query: 361 accaaagacgtcaagtagat 380
           ||||||||||||||||||||
Sbjct: 422 accaaagacgtcaagtagat 441


>gnl|LJGI|TC63377 similar to UniRef100_A9SBS3 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (98%)
          Length = 683

 Score =  753 bits (380), Expect = 0.0
 Identities = 380/380 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgacaatcagcctccggaagggaaacacacggttgccaccggaagtcaaccgcgtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  atggcgacaatcagcctccggaagggaaacacacggttgccaccggaagtcaaccgcgtc 121

                                                                       
Query: 61  ctctacgtccgaaacctcccattcaacatcacaagcgaggagatgtacgatatcttcggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctctacgtccgaaacctcccattcaacatcacaagcgaggagatgtacgatatcttcggc 181

                                                                       
Query: 121 aagtacggcgcaatccgccagatccgaatcggaaccaccaaggacacgcgcggcaccgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aagtacggcgcaatccgccagatccgaatcggaaccaccaaggacacgcgcggcaccgcc 241

                                                                       
Query: 181 ttcgtcgtgtatgaggacatctacgacgccaaaaccgccgtcgatcacctctccggcttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttcgtcgtgtatgaggacatctacgacgccaaaaccgccgtcgatcacctctccggcttc 301

                                                                       
Query: 241 aacgtcgccaaccgctacctcatcgtgttgtattaccagcaggcgaagatgagcaagaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aacgtcgccaaccgctacctcatcgtgttgtattaccagcaggcgaagatgagcaagaag 361

                                                                       
Query: 301 tttgaccagaagaagaaggaggatgagatcgcgaggatgcaggagaagtatggcgtttcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tttgaccagaagaagaaggaggatgagatcgcgaggatgcaggagaagtatggcgtttcc 421

                               
Query: 361 accaaagacgtcaagtagat 380
           ||||||||||||||||||||
Sbjct: 422 accaaagacgtcaagtagat 441