Miyakogusa Predicted Gene
- Lj2g3v3022760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3022760.1 tr|G7K315|G7K315_MEDTR Dihydropyrimidinase
OS=Medicago truncatula GN=MTR_5g089280 PE=4
SV=1,85.88,0,Metallo-dependent hydrolases,NULL; Composite domain of
metallo-dependent hydrolases,Metal-dependent ,CUFF.39624.1
(1614 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61872 similar to UniRef100_A7PFT8 Cluster: Chromosome... 1231 0.0
gnl|LJGI|TC65147 similar to UniRef100_A7R889 Cluster: Chromosome... 946 0.0
gnl|LJGI|TC62872 similar to UniRef100_A7PFT8 Cluster: Chromosome... 519 e-146
gnl|LJGI|TC77268 similar to UniRef100_A7R889 Cluster: Chromosome... 498 e-140
gnl|LJGI|BP071559 similar to UniRef100_A7R889 Cluster: Chromosom... 337 1e-91
>gnl|LJGI|TC61872 similar to UniRef100_A7PFT8 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 736
Score = 1231 bits (621), Expect = 0.0
Identities = 621/621 (100%)
Strand = Plus / Plus
Query: 100 caaccaaacaacaaccagttctgtgaagctggaattggacacactgaatcttcatgcgga 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 caaccaaacaacaaccagttctgtgaagctggaattggacacactgaatcttcatgcgga 175
Query: 160 actggaaccccatcatcatccaagttgctgatcaagggtggcaccgtcgtcaatgctcat 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 actggaaccccatcatcatccaagttgctgatcaagggtggcaccgtcgtcaatgctcat 235
Query: 220 caccaacacgttgctgatgtttacatcgaagatggcatcatcgttgctgttaatccaacc 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 caccaacacgttgctgatgtttacatcgaagatggcatcatcgttgctgttaatccaacc 295
Query: 280 atcaacgttggagatgaaatcaaagtgatcgatgccaccgggaagttcatcatgcccggg 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 atcaacgttggagatgaaatcaaagtgatcgatgccaccgggaagttcatcatgcccggg 355
Query: 340 ggcattgatcctcatacccacctggagtttgagtttatgaatactgtgacagtagatgac 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ggcattgatcctcatacccacctggagtttgagtttatgaatactgtgacagtagatgac 415
Query: 400 ttcttcagtggtcaagctgcagcattagctggcgggacaactatgcacattgacttcgtt 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ttcttcagtggtcaagctgcagcattagctggcgggacaactatgcacattgacttcgtt 475
Query: 460 ataccgcttaatgggagtttaacggctgggtttgaagcgtatgaaaagaaggcgaagaag 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ataccgcttaatgggagtttaacggctgggtttgaagcgtatgaaaagaaggcgaagaag 535
Query: 520 gcttgcatggattatgggttccatatggctgtcaccaagtgggatgaaactgtttcgaga 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gcttgcatggattatgggttccatatggctgtcaccaagtgggatgaaactgtttcgaga 595
Query: 580 gaaatggaaatcatggtcaaggagaaaggtatcaactcctttaagtttttcatggcatac 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gaaatggaaatcatggtcaaggagaaaggtatcaactcctttaagtttttcatggcatac 655
Query: 640 aaaggagctctcatgatcaatgatgagcttcttctggaagcatttaaaaaatgcaagtcc 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 aaaggagctctcatgatcaatgatgagcttcttctggaagcatttaaaaaatgcaagtcc 715
Query: 700 cttggcgccttagccatggtc 720
|||||||||||||||||||||
Sbjct: 716 cttggcgccttagccatggtc 736
Score = 81.8 bits (41), Expect = 1e-14
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 atgcagctgaattgcagtgaagcaatggtgttcacttcgta 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 atgcagctgaattgcagtgaagcaatggtgttcacttcgta 57
>gnl|LJGI|TC65147 similar to UniRef100_A7R889 Cluster: Chromosome undetermined
scaffold_2360, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_2360,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (79%)
Length = 676
Score = 946 bits (477), Expect = 0.0
Identities = 487/489 (99%), Gaps = 1/489 (0%)
Strand = Plus / Plus
Query: 1126 tgtgcctttaattccacccagaaagcttttggaattgatgacttccggaaaattcctaat 1185
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcctttaattcc-cccagaaagcttttggaattgatgacttccggaaaattcctaat 59
Query: 1186 ggtgtcaatggcattgaagaaaggatgcatatagtatgggatatcatggtggattctggc 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ggtgtcaatggcattgaagaaaggatgcatatagtatgggatatcatggtggattctggc 119
Query: 1246 cagatatctgtcactgactatgtccgggtgaccagcaccgaatgtgctaaagtcttcaat 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 120 cagatatctgtcactgactatgtccgggtgaccagcaccgaatgtgctaaagttttcaat 179
Query: 1306 atatatccaaagaaaggagctattcttccaggatctgatgcagacattatcatcctcaat 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atatatccaaagaaaggagctattcttccaggatctgatgcagacattatcatcctcaat 239
Query: 1366 ccaaattcaagctttgagataactgtgaagtcacaccactccaggctggacacaaacgtc 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ccaaattcaagctttgagataactgtgaagtcacaccactccaggctggacacaaacgtc 299
Query: 1426 tatgagggaagaaggggaaagggcaaagttgaagtgactatagcaggaggaagaattgtt 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tatgagggaagaaggggaaagggcaaagttgaagtgactatagcaggaggaagaattgtt 359
Query: 1486 tgggaaaacaatgaactgaaggttgctcctggtactggaaaatacataaaaacgcctcct 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tgggaaaacaatgaactgaaggttgctcctggtactggaaaatacataaaaacgcctcct 419
Query: 1546 tttaattatctatttgatggactggacaagaaagatgccagttatctgaattcccttcaa 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tttaattatctatttgatggactggacaagaaagatgccagttatctgaattcccttcaa 479
Query: 1606 gccccagta 1614
|||||||||
Sbjct: 480 gccccagta 488
>gnl|LJGI|TC62872 similar to UniRef100_A7PFT8 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 860
Score = 519 bits (262), Expect = e-146
Identities = 585/693 (84%), Gaps = 6/693 (0%)
Strand = Plus / Plus
Query: 111 caaccagttctgtgaagctggaattggacacactgaatcttcatgcggaactggaacccc 170
|||||||||||||||||||||||||| | ||||| |||| |||||||||| |||
Sbjct: 174 caaccagttctgtgaagctggaattgca------gaatcagcatgtggaactggaatccc 227
Query: 171 atcatcatccaagttgctgatcaagggtggcaccgtcgtcaatgctcatcaccaacacgt 230
|||||||||||| ||| ||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 228 atcatcatccaaattgttgatcaaaggtggcaccgtcgtcaacgctcaccaccaacacgt 287
Query: 231 tgctgatgtttacatcgaagatggcatcatcgttgctgttaatccaaccatcaacgttgg 290
||||||||| ||| | || |||||||||||||| || ||| | || |||||||||||
Sbjct: 288 tgctgatgtctacgtagaggatggcatcatcgtagccgttgaccccgatatcaacgttgg 347
Query: 291 agatgaaatcaaagtgatcgatgccaccgggaagttcatcatgcccgggggcattgatcc 350
|||||| | || || || |||||||| || |||||| ||||||| || || ||||||||
Sbjct: 348 agatgatgtgaatgtcatagatgccactggcaagttcgtcatgccaggaggaattgatcc 407
Query: 351 tcatacccacctggagtttgagtttatgaatactgtgacagtagatgacttcttcagtgg 410
||| |||||||| | | | ||| | || ||| | ||||||||||||||||||||||
Sbjct: 408 tcacacccacctagcgatagagggtttggatattacatcagtagatgacttcttcagtgg 467
Query: 411 tcaagctgcagcattagctggcgggacaactatgcacattgacttcgttataccgcttaa 470
||| ||||||||||||||||| |||||||| ||||||||||| ||| ||||||| |||
Sbjct: 468 tcaggctgcagcattagctggtgggacaacgatgcacattgatttcattataccatctaa 527
Query: 471 tgggagtttaacggctgggtttgaagcgtatgaaaagaaggcgaagaaggcttgcatgga 530
||||| |||| | |||| ||||| | |||||||||||||| |||||| ||||||||||
Sbjct: 528 tgggaatttatcagctgcttttgatgtctatgaaaagaaggcaaagaagtcttgcatgga 587
Query: 531 ttatgggttccatatggctgtcaccaagtgggatgaaactgtttcgagagaaatggaaat 590
||||| ||||| ||||| | ||||| ||||||||| |||||| ||||| ||||| |
Sbjct: 588 ctatggtttccacgtggctataaccaaatgggatgaaggtgtttcaagagatatggagct 647
Query: 591 catggtcaaggagaaaggtatcaactcctttaagtttttcatggcatacaaaggagctct 650
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |
Sbjct: 648 catggtcaaggagaaaggtatcaactcttttaagtttttcatggcatacaaaggaattgt 707
Query: 651 catgatcaatgatgagcttcttctggaagcatttaaaaaatgcaagtcccttggcgcctt 710
|||| ||||||||||||| ||||| ||| ||| || || |||||||||||||| |||||
Sbjct: 708 catggtcaatgatgagctccttctcaaaggattcaagaagtgcaagtcccttggtgcctt 767
Query: 711 agccatggtccatgcagaaaatggagatgctgtgtatgaaggtcaaaatagaatgattga 770
|||||||||||||||||||||||||||||| || |||||||| ||||| | |||||| ||
Sbjct: 768 agccatggtccatgcagaaaatggagatgcagtatatgaagggcaaaagaaaatgataga 827
Query: 771 gcttggaataacaggtcctgaggggcatgctct 803
||||||||||| ||||| ||||||||| ||||
Sbjct: 828 acttggaataactggtcccgaggggcatcctct 860
>gnl|LJGI|TC77268 similar to UniRef100_A7R889 Cluster: Chromosome undetermined
scaffold_2360, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_2360,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (43%)
Length = 1094
Score = 498 bits (251), Expect = e-140
Identities = 254/255 (99%)
Strand = Plus / Plus
Query: 1360 ctcaatccaaattcaagctttgagataactgtgaagtcacaccactccaggctggacaca 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcaatccaaattcaagctttgagataactgtgaagtcacaccactccaggctggacaca 60
Query: 1420 aacgtctatgagggaagaaggggaaagggcaaagttgaagtgactatagcaggaggaaga 1479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacgtctatgagggaagaaggggaaagggcaaagttgaagtgactatagcaggaggaaga 120
Query: 1480 attgtttgggaaaacaatgaactgaaggttgctcctggtactggaaaatacataaaaacg 1539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgtttgggaaaacaatgaactgaaggttgctcctggtactggaaaatacataaaaacg 180
Query: 1540 cctccttttaattatctatttgatggactggacaagaaagatgccagttatctgaattcc 1599
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 cctccttttaattatctatttgatggactggacaagaaagatgccagttatttgaattcc 240
Query: 1600 cttcaagccccagta 1614
|||||||||||||||
Sbjct: 241 cttcaagccccagta 255
>gnl|LJGI|BP071559 similar to UniRef100_A7R889 Cluster: Chromosome undetermined
scaffold_2360, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_2360,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (29%)
Length = 379
Score = 337 bits (170), Expect = 1e-91
Identities = 170/170 (100%)
Strand = Plus / Minus
Query: 1445 agggcaaagttgaagtgactatagcaggaggaagaattgtttgggaaaacaatgaactga 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 agggcaaagttgaagtgactatagcaggaggaagaattgtttgggaaaacaatgaactga 272
Query: 1505 aggttgctcctggtactggaaaatacataaaaacgcctccttttaattatctatttgatg 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aggttgctcctggtactggaaaatacataaaaacgcctccttttaattatctatttgatg 212
Query: 1565 gactggacaagaaagatgccagttatctgaattcccttcaagccccagta 1614
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gactggacaagaaagatgccagttatctgaattcccttcaagccccagta 162