Miyakogusa Predicted Gene
- Lj2g3v3019660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3019660.1 Non Chatacterized Hit- tr|C5X3D4|C5X3D4_SORBI
Putative uncharacterized protein Sb02g040790
OS=Sorghu,45.08,2e-16,"Winged helix" DNA-binding domain,NULL;
HSF_DOMAIN,Heat shock factor (HSF)-type, DNA-binding;
HSFDOM,CUFF.39597.1
(825 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81087 similar to UniRef100_A7PUH3 Cluster: Chromosome... 72 6e-12
gnl|LJGI|GO020615 similar to UniRef100_Q9SCW5 Cluster: Heat stre... 68 9e-11
gnl|LJGI|TC67251 similar to UniRef100_Q43457 Cluster: Heat shock... 68 9e-11
gnl|LJGI|TC64067 similar to UniRef100_A7PC49 Cluster: Chromosome... 68 9e-11
gnl|LJGI|TC72619 similar to UniRef100_Q0DBL6 Cluster: Os06g05531... 66 4e-10
gnl|LJGI|TC67363 homologue to UniRef100_Q008S0 Cluster: Heat sho... 66 4e-10
gnl|LJGI|TC57770 homologue to UniRef100_Q008S0 Cluster: Heat sho... 66 4e-10
gnl|LJGI|TC61658 similar to UniRef100_Q9SXK8 Cluster: Heat shock... 60 2e-08
gnl|LJGI|TC59358 similar to UniRef100_A7R2K1 Cluster: Chromosome... 60 2e-08
gnl|LJGI|TC76413 similar to UniRef100_Q43454 Cluster: Heat shock... 58 9e-08
gnl|LJGI|BW596506 homologue to UniRef100_Q43457 Cluster: Heat sh... 52 6e-06
gnl|LJGI|TC74170 similar to UniRef100_A7PWH5 Cluster: Chromosome... 52 6e-06
gnl|LJGI|TC60210 similar to UniRef100_Q43457 Cluster: Heat shock... 52 6e-06
>gnl|LJGI|TC81087 similar to UniRef100_A7PUH3 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 873
Score = 71.9 bits (36), Expect = 6e-12
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 205 ttcaagcacaacaacttctctagctttgttaggcagctaaacacctatggtttcaagaag 264
|||||||||||||| ||||| || ||||| ||||| || ||||||||||| || ||||||
Sbjct: 228 ttcaagcacaacaatttctccagttttgtcaggcaactcaacacctatgggtttaagaag 287
Query: 265 atagttgctgataggtgggagtttgcaaatga 296
| | | | ||||||||||||||||| |||||
Sbjct: 288 gttgatccagataggtgggagtttgccaatga 319
>gnl|LJGI|GO020615 similar to UniRef100_Q9SCW5 Cluster: Heat stress transcription
factor A-1e; n=1; Arabidopsis thaliana|Rep: Heat stress
transcription factor A-1e - Arabidopsis thaliana
(Mouse-ear cress), partial (20%)
Length = 438
Score = 67.9 bits (34), Expect = 9e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 196 cccaactatttcaagcacaacaacttctctagctttgttaggcagctaaacacctatggt 255
|||| |||||||||||||||||||||||| ||||| || || || || ||||||||||||
Sbjct: 209 cccacctatttcaagcacaacaacttctccagcttcgtcagacaactcaacacctatggt 268
Query: 256 tt 257
||
Sbjct: 269 tt 270
>gnl|LJGI|TC67251 similar to UniRef100_Q43457 Cluster: Heat shock transcription
factor 34; n=1; Glycine max|Rep: Heat shock
transcription factor 34 - Glycine max (Soybean), partial
(61%)
Length = 1408
Score = 67.9 bits (34), Expect = 9e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 193 cttcccaactatttcaagcacaacaacttctctagctttgtt 234
|||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 579 cttcccaagtatttcaagcacaacaacttctccagctttgtt 620
>gnl|LJGI|TC64067 similar to UniRef100_A7PC49 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 735
Score = 67.9 bits (34), Expect = 9e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 196 cccaactatttcaagcacaacaacttctctagctttgttaggcagctaaacacctatggt 255
|||| |||||||||||||||||||||||| ||||| || || || || ||||||||||||
Sbjct: 253 cccacctatttcaagcacaacaacttctccagcttcgtcagacaactcaacacctatggt 312
Query: 256 tt 257
||
Sbjct: 313 tt 314
>gnl|LJGI|TC72619 similar to UniRef100_Q0DBL6 Cluster: Os06g0553100 protein; n=1;
Oryza sativa Japonica Group|Rep: Os06g0553100 protein -
Oryza sativa subsp. japonica (Rice), partial (37%)
Length = 530
Score = 65.9 bits (33), Expect = 4e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 205 ttcaagcacaacaacttctctagctttgttaggcagctaaacacctatggtttcaagaag 264
||||||||||| || ||||| ||||| ||| | ||||| |||||||||||||||| |||
Sbjct: 328 ttcaagcacaataatttctcaagcttcgttcgccagctcaacacctatggtttcagaaag 387
Query: 265 atagttgctgataggtgggagtttgcaaa 293
| | | ||||| ||||||||||||||||
Sbjct: 388 gtggatcctgatcggtgggagtttgcaaa 416
>gnl|LJGI|TC67363 homologue to UniRef100_Q008S0 Cluster: Heat shock transcription
factor 1; n=1; Medicago sativa|Rep: Heat shock
transcription factor 1 - Medicago sativa (Alfalfa),
partial (40%)
Length = 808
Score = 65.9 bits (33), Expect = 4e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 205 ttcaagcacaacaacttctctagctttgttaggcagctaaacacctatggtttcaagaag 264
|||||||||||||||||||| ||||| || |||||| | || || |||||||||| ||||
Sbjct: 403 ttcaagcacaacaacttctccagcttcgtcaggcagttgaatacatatggtttcaggaag 462
Query: 265 atagttgctgataggtgggagtttgcaaatgaa 297
| | | ||||| | ||||| ||||||||||||
Sbjct: 463 gttgatcctgatcgatgggaatttgcaaatgaa 495
>gnl|LJGI|TC57770 homologue to UniRef100_Q008S0 Cluster: Heat shock transcription
factor 1; n=1; Medicago sativa|Rep: Heat shock
transcription factor 1 - Medicago sativa (Alfalfa),
partial (40%)
Length = 838
Score = 65.9 bits (33), Expect = 4e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 205 ttcaagcacaacaacttctctagctttgttaggcagctaaacacctatggtttcaagaag 264
|||||||||||||||||||| ||||| || |||||| | || || |||||||||| ||||
Sbjct: 401 ttcaagcacaacaacttctccagcttcgtcaggcagttgaatacatatggtttcaggaag 460
Query: 265 atagttgctgataggtgggagtttgcaaatgaa 297
| | | ||||| | ||||| ||||||||||||
Sbjct: 461 gttgatcctgatcgatgggaatttgcaaatgaa 493
>gnl|LJGI|TC61658 similar to UniRef100_Q9SXK8 Cluster: Heat shock factor; n=1;
Nicotiana tabacum|Rep: Heat shock factor - Nicotiana
tabacum (Common tobacco), partial (21%)
Length = 708
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 205 ttcaagcacaacaacttctctagctttgttaggcagctaaacacctatgg 254
|||||||||||||||||||| || ||| |||||||||| ||||| |||||
Sbjct: 621 ttcaagcacaacaacttctcaagttttattaggcagctcaacacttatgg 670
>gnl|LJGI|TC59358 similar to UniRef100_A7R2K1 Cluster: Chromosome chr10 scaffold_433,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_433, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (67%)
Length = 820
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 202 tatttcaagcacaacaacttctctagctttgttaggcagctaaacacctatggtttcaag 261
||||||||||||||||||||||||||||| || | || | ||||| ||||||||||||
Sbjct: 263 tatttcaagcacaacaacttctctagcttcattcgccaattgaacacatatggtttcaag 322
Query: 262 aa 263
||
Sbjct: 323 aa 324
>gnl|LJGI|TC76413 similar to UniRef100_Q43454 Cluster: Heat shock transcription
factor 21; n=1; Glycine max|Rep: Heat shock
transcription factor 21 - Glycine max (Soybean), partial
(83%)
Length = 723
Score = 58.0 bits (29), Expect = 9e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 205 ttcaagcacaacaacttctctagctttgttaggcagctaaacacctatggttt 257
|||||||||||||||||||| ||||| ||| | ||||| || |||||||||||
Sbjct: 407 ttcaagcacaacaacttctccagcttcgttcgccagctcaatacctatggttt 459
>gnl|LJGI|BW596506 homologue to UniRef100_Q43457 Cluster: Heat shock transcription
factor 34; n=1; Glycine max|Rep: Heat shock
transcription factor 34 - Glycine max (Soybean), partial
(23%)
Length = 486
Score = 52.0 bits (26), Expect = 6e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 205 ttcaagcacaacaacttctctagctttgttaggcagctaaacacctatggtttcaagaag 264
|||||||| ||||| ||||| |||||||| | ||||| || ||||||||||||| ||||
Sbjct: 391 ttcaagcataacaatttctccagctttgtgcgtcagctcaatacctatggtttcaggaag 450
Query: 265 at 266
||
Sbjct: 451 at 452
>gnl|LJGI|TC74170 similar to UniRef100_A7PWH5 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1114
Score = 52.0 bits (26), Expect = 6e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 205 ttcaagcacaacaacttctctagctttgttaggcagctaaacacctatgg 254
|||||||||| |||||||||||||||||| |||| || || ||||||||
Sbjct: 432 ttcaagcacagcaacttctctagctttgtccggcaactcaatacctatgg 481
>gnl|LJGI|TC60210 similar to UniRef100_Q43457 Cluster: Heat shock transcription
factor 34; n=1; Glycine max|Rep: Heat shock
transcription factor 34 - Glycine max (Soybean), partial
(74%)
Length = 1776
Score = 52.0 bits (26), Expect = 6e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 205 ttcaagcacaacaacttctctagctttgttaggcagctaaacacctatggtttcaagaag 264
|||||||| ||||| ||||| |||||||| | ||||| || ||||||||||||| ||||
Sbjct: 498 ttcaagcataacaatttctccagctttgtgcgtcagctcaatacctatggtttcaggaag 557
Query: 265 at 266
||
Sbjct: 558 at 559