Miyakogusa Predicted Gene

Lj2g3v3018610.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3018610.1 CUFF.39727.1
         (264 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71412 weakly similar to UniRef100_Q6NQD2 Cluster: At5...   464   e-130
gnl|LJGI|TC79791 similar to UniRef100_A7QDY4 Cluster: Chromosome...   182   7e-46

>gnl|LJGI|TC71412 weakly similar to UniRef100_Q6NQD2 Cluster: At5g12240; n=1;
           Arabidopsis thaliana|Rep: At5g12240 - Arabidopsis
           thaliana (Mouse-ear cress), partial (41%)
          Length = 515

 Score =  464 bits (234), Expect = e-130
 Identities = 234/234 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatgaatctgaatttcaacgccttcttcaactcttccctgttgttcgttctcgcgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  atggatgaatctgaatttcaacgccttcttcaactcttccctgttgttcgttctcgcgat 146

                                                                       
Query: 61  tactgtgcagaaaccagttcttcgagtcaattaccatctggatctgcacaggatgaggag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tactgtgcagaaaccagttcttcgagtcaattaccatctggatctgcacaggatgaggag 206

                                                                       
Query: 121 ctaaaagaatggcaagatgcatgggatgaaagggatagggattttgagaatcgaggaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ctaaaagaatggcaagatgcatgggatgaaagggatagggattttgagaatcgaggaatt 266

                                                                 
Query: 181 actaaacatgattcattttggagcaagctaaagtcagaggccgctaggaaggtc 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 actaaacatgattcattttggagcaagctaaagtcagaggccgctaggaaggtc 320


>gnl|LJGI|TC79791 similar to UniRef100_A7QDY4 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (3%)
          Length = 847

 Score =  182 bits (92), Expect = 7e-46
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                       
Query: 173 gaggaattactaaacatgattcattttggagcaagctaaagtcagaggccgctaggaagg 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gaggaattactaaacatgattcattttggagcaagctaaagtcagaggccgctaggaagg 638

                                           
Query: 233 tcggtacagaggaagcagagagattttgcaag 264
           ||||||||||||||||||||||||||||||||
Sbjct: 639 tcggtacagaggaagcagagagattttgcaag 670