Miyakogusa Predicted Gene
- Lj2g3v2996200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2996200.1 tr|P93320|P93320_MEDSA Cdc2MsC protein
OS=Medicago sativa GN=cdc2MsC PE=2 SV=1,94.27,0,no description,NULL;
CYCLIN-DEPENDENT KINASE C,NULL; CELL DIVISION PROTEIN KINASE,NULL;
PROTEIN_KINA,CUFF.39563.1
(1050 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57356 homologue to UniRef100_P93320 Cluster: Cdc2MsC ... 1215 0.0
gnl|LJGI|TC71004 homologue to UniRef100_P93320 Cluster: Cdc2MsC ... 472 e-132
gnl|LJGI|TC60025 homologue to UniRef100_P93320 Cluster: Cdc2MsC ... 143 3e-33
gnl|LJGI|TC66176 similar to UniRef100_A7PG30 Cluster: Chromosome... 58 1e-07
gnl|LJGI|AU251534 homologue to UniRef100_A7Q5S2 Cluster: Chromos... 52 7e-06
>gnl|LJGI|TC57356 homologue to UniRef100_P93320 Cluster: Cdc2MsC protein; n=1;
Medicago sativa|Rep: Cdc2MsC protein - Medicago sativa
(Alfalfa), partial (39%)
Length = 836
Score = 1215 bits (613), Expect = 0.0
Identities = 613/613 (100%)
Strand = Plus / Plus
Query: 1 atggctacgggaactcttggtcaaatcaatgcgattgaatctcctttggtgggatccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atggctacgggaactcttggtcaaatcaatgcgattgaatctcctttggtgggatccaga 283
Query: 61 agcgttgattgtttcgagaagttggaacaaattggcgagggcacatatggtcaagtttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agcgttgattgtttcgagaagttggaacaaattggcgagggcacatatggtcaagtttac 343
Query: 121 atggctaaagagcataagacgggtgaaattgttgctctgaagaaaatacgaatggacaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atggctaaagagcataagacgggtgaaattgttgctctgaagaaaatacgaatggacaat 403
Query: 181 gagagagaagggtttcccataactgctatacgtgaaatcaaaattctaaagaaactccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gagagagaagggtttcccataactgctatacgtgaaatcaaaattctaaagaaactccac 463
Query: 241 catgaaaatgtaatcaagttgaaagaaatagtgacttctccaggacccgagaaagatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 catgaaaatgtaatcaagttgaaagaaatagtgacttctccaggacccgagaaagatgaa 523
Query: 301 caagggaggccagatggtaataaatacaaaggtggcatttacatggtctttgaatacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 caagggaggccagatggtaataaatacaaaggtggcatttacatggtctttgaatacatg 583
Query: 361 gaccatgatttgacaggtcttgctgaccgacctgggatgagatttactgtccctcaaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gaccatgatttgacaggtcttgctgaccgacctgggatgagatttactgtccctcaaatt 643
Query: 421 aagtgttacatgagacagcttttgacggggcttcattattgtcatgtaaatcaagtactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aagtgttacatgagacagcttttgacggggcttcattattgtcatgtaaatcaagtactt 703
Query: 481 catcgtgatatcaaaggctcaaatcttcttatagataatgaaggcaatttgaagcttgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 catcgtgatatcaaaggctcaaatcttcttatagataatgaaggcaatttgaagcttgca 763
Query: 541 gattttggattggctcgatcattttctaatgagcacaatgcaaatcttacaaaccgtgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gattttggattggctcgatcattttctaatgagcacaatgcaaatcttacaaaccgtgtc 823
Query: 601 atcacgttatggt 613
|||||||||||||
Sbjct: 824 atcacgttatggt 836
>gnl|LJGI|TC71004 homologue to UniRef100_P93320 Cluster: Cdc2MsC protein; n=1;
Medicago sativa|Rep: Cdc2MsC protein - Medicago sativa
(Alfalfa), partial (30%)
Length = 696
Score = 472 bits (238), Expect = e-132
Identities = 382/430 (88%)
Strand = Plus / Plus
Query: 51 gggatccagaagcgttgattgtttcgagaagttggaacaaattggcgagggcacatatgg 110
|||||||||||| || ||||| |||||||| ||||| |||||||| || |||||||||||
Sbjct: 267 gggatccagaagtgtcgattgcttcgagaaattggagcaaattggtgaaggcacatatgg 326
Query: 111 tcaagtttacatggctaaagagcataagacgggtgaaattgttgctctgaagaaaatacg 170
||| || | |||||| || ||| | || |||||||| ||||||||||||| |||||
Sbjct: 327 tcaggtcttcatggcgaaggagatcgaaaccggtgaaatcgttgctctgaagaggatacg 386
Query: 171 aatggacaatgagagagaagggtttcccataactgctatacgtgaaatcaaaattctaaa 230
|||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||
Sbjct: 387 gatggacaatgagagagaagggtttcctataactgctatacgagaaatcaaaattttaaa 446
Query: 231 gaaactccaccatgaaaatgtaatcaagttgaaagaaatagtgacttctccaggacccga 290
|||||| |||||||| ||||| ||| || |||||||||| |||||||| ||||| || ||
Sbjct: 447 gaaactgcaccatgagaatgtgatcgagctgaaagaaattgtgacttcgccaggccctga 506
Query: 291 gaaagatgaacaagggaggccagatggtaataaatacaaaggtggcatttacatggtctt 350
|| ||||| |||||| |||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 507 gagagatggacaaggaaggccagatggtaacaaatataaaggtggtatttacatggtctt 566
Query: 351 tgaatacatggaccatgatttgacaggtcttgctgaccgacctgggatgagatttactgt 410
||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||
Sbjct: 567 tgaatacatggaccatgatttaacaggtcttgctgaccgacctgaaatgagatttacagt 626
Query: 411 ccctcaaattaagtgttacatgagacagcttttgacggggcttcattattgtcatgtaaa 470
||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 627 tcctcaaattaagtgttatatgagacagcttttgacggggcttcactactgtcatgtaaa 686
Query: 471 tcaagtactt 480
||||||||||
Sbjct: 687 tcaagtactt 696
>gnl|LJGI|TC60025 homologue to UniRef100_P93320 Cluster: Cdc2MsC protein; n=1; Medicago
sativa|Rep: Cdc2MsC protein - Medicago sativa (Alfalfa),
partial (34%)
Length = 892
Score = 143 bits (72), Expect = 3e-33
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 979 gatccattaccatgtgatcccaagagtttacccaagtatgagtcatcacatgagttccaa 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatccattaccatgtgatcccaagagtttacccaagtatgagtcatcacatgagttccaa 60
Query: 1039 accaagaaaaag 1050
||||||||||||
Sbjct: 61 accaagaaaaag 72
>gnl|LJGI|TC66176 similar to UniRef100_A7PG30 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 629
Score = 58.0 bits (29), Expect = 1e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 495 aggctcaaatcttcttatagataatgaaggcaatttgaagcttgc 539
||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct: 494 aggctcagaacttctcattgataatgaaggcaatttgaagcttgc 538
>gnl|LJGI|AU251534 homologue to UniRef100_A7Q5S2 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 391
Score = 52.0 bits (26), Expect = 7e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 475 gtacttcatcgtgatatcaaaggctcaaatcttcttatagataatgaagg 524
|||||||| || ||||| ||||| |||||||||||||| || ||||||||
Sbjct: 77 gtacttcaccgagatattaaaggatcaaatcttcttattgacaatgaagg 126