Miyakogusa Predicted Gene
- Lj2g3v2972740.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2972740.2 Non Chatacterized Hit- tr|B6T0J3|B6T0J3_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4
SV=1,80.7,2e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.39556.2
(489 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67911 homologue to UniRef100_A7PG48 Cluster: Chromoso... 969 0.0
gnl|LJGI|TC77636 similar to UniRef100_A7PG48 Cluster: Chromosome... 470 e-132
gnl|LJGI|AV773451 similar to UniRef100_A7PG48 Cluster: Chromosom... 188 2e-47
>gnl|LJGI|TC67911 homologue to UniRef100_A7PG48 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1200
Score = 969 bits (489), Expect = 0.0
Identities = 489/489 (100%)
Strand = Plus / Plus
Query: 1 atggcaaacaccattgctggtgaagaaacagtgcataagcttgcttcacttttgctcgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 atggcaaacaccattgctggtgaagaaacagtgcataagcttgcttcacttttgctcgtc 425
Query: 61 tttctcggtggtagttatgtcctattgttttttatgggaaaaggcggccatagccattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tttctcggtggtagttatgtcctattgttttttatgggaaaaggcggccatagccattca 485
Query: 121 cacaaccaacccatggagaaaatggctgtagctgggcttattcttgttccagcattgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cacaaccaacccatggagaaaatggctgtagctgggcttattcttgttccagcattgtct 545
Query: 181 ccttgtgctacaacacttccagtatttcttgctgtgggaagttcatcttccatgatggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ccttgtgctacaacacttccagtatttcttgctgtgggaagttcatcttccatgatggtg 605
Query: 241 ctcgcgatcatagtgctgctattcagcacaatatctgtgatgacttcgctagtagcattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ctcgcgatcatagtgctgctattcagcacaatatctgtgatgacttcgctagtagcattg 665
Query: 301 tcattttatggggcgagtcagctgaagtttcattgggtggagcgatatgacaaacttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tcattttatggggcgagtcagctgaagtttcattgggtggagcgatatgacaaacttctt 725
Query: 361 gttggttcagtactgtgtttagttggagttttgaccctaattttccatcatcatgatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gttggttcagtactgtgtttagttggagttttgaccctaattttccatcatcatgatcat 785
Query: 421 gatcatgaccacggaaaagttggttcagttggagagcacatccataggaagctcatttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 gatcatgaccacggaaaagttggttcagttggagagcacatccataggaagctcatttcc 845
Query: 481 ttgtgagat 489
|||||||||
Sbjct: 846 ttgtgagat 854
>gnl|LJGI|TC77636 similar to UniRef100_A7PG48 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (93%)
Length = 969
Score = 470 bits (237), Expect = e-132
Identities = 380/427 (88%), Gaps = 3/427 (0%)
Strand = Plus / Plus
Query: 1 atggcaaacaccattgctggtgaagaaacagtgcataagcttgcttcacttttgctcgtc 60
|||||||||||||||| |||||||||| |||| || |||||||| ||||||||||| ||
Sbjct: 352 atggcaaacaccattgttggtgaagaagcagttcacaagcttgcatcacttttgcttgtg 411
Query: 61 tttctcggtggtagttatgtcctattgttttttatgggaaaaggcggccatagccattca 120
||||| || ||||||||||| || |||||||| | ||||| || ||||||| |||||
Sbjct: 412 tttctaggcggtagttatgttctgttgtttttggttggaaagggtggccataatcattcg 471
Query: 121 cacaaccaacccatggagaaaatggctgtagctgggcttattcttgttccagcattgtct 180
||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 472 cacaaccaaccgatggagaaaatggctgttgctgggcttattcttgttcctgcattgtct 531
Query: 181 ccttgtgctacaacacttccagtatttcttgctgtgggaagttcatcttccatgatggtg 240
|||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||||||
Sbjct: 532 ccttgtgccacaacacttccagtatttcttgctgttggaaattcatctaccatgatggtg 591
Query: 241 ctcgcgatcatagtgctgctattcagcacaatatctgtgatgacttcgctagtagcattg 300
|| || ||||||||| |||||||||| |||||| ||||||||||||| || ||||| ||
Sbjct: 592 ctggctatcatagtgttgctattcagtacaataactgtgatgacttcactggtagcgtta 651
Query: 301 tcattttatggggcgagtcagctgaagtttcattgggtggagcgatatgacaaacttctt 360
||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||
Sbjct: 652 tcattctatggggccagtcagctgaagtttcactgggtagagcggtatgacaaactcctt 711
Query: 361 gttggttcagtactgtgtttagttggagttttgaccctaattttccatcatcatgatcat 420
|||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||
Sbjct: 712 gttggttcagtactgtgtttggttggagttttgaccctaatttt---tcatgatgatcat 768
Query: 421 gatcatg 427
||||||
Sbjct: 769 catcatg 775
>gnl|LJGI|AV773451 similar to UniRef100_A7PG48 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 488
Score = 188 bits (95), Expect = 2e-47
Identities = 257/301 (85%), Gaps = 10/301 (3%)
Strand = Plus / Minus
Query: 134 tggagaaaatggctgtagctgggcttattcttgttccagcattgtctccttgtgctacaa 193
|||||||||||||||| |||||||||| ||||||||| || |||||||||||| | |||
Sbjct: 431 tggagaaaatggctgttgctgggcttagtcttgttcctgccttgtctccttgtcccacac 372
Query: 194 ca-cttccagta-tttcttgctgtgggaagttcatcttccatga-tggtgctcgcgatca 250
|| ||||| ||| | ||||||||| |||| ||||||| |||||| ||||||| || ||||
Sbjct: 371 caccttcccgtactctcttgctgttggaaattcatctaccatgactggtgctggctatca 312
Query: 251 tagtgctgctattcagcacaatatctgtgatgacttcgctagtagcattgtcatttta-t 309
||||| |||||||||| || ||| ||||||||||||| | ||||| || ||||| || |
Sbjct: 311 tagtgttgctattcagtaccataactgtgatgacttcaatggtagcgttatcattctact 252
Query: 310 ggggcgagtca-gctgaagtttcattggg-tggagcgatatgacaaacttcttg-ttggt 366
||||| ||||| ||||||||||| |||| | ||||| ||||||||||| |||| |||||
Sbjct: 251 ggggccagtcaccctgaagtttcactgggctagagcggtatgacaaactccttgcttggt 192
Query: 367 tcagtactgtgtttagttggagttttgaccctaattttccatcatcatgatcatgatcat 426
||||||| |||||| ||||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 191 tcagtaccgtgtttggttggagttttgaccctaatttt---tcatgatgatcatcatcat 135
Query: 427 g 427
|
Sbjct: 134 g 134