Miyakogusa Predicted Gene
- Lj2g3v2972740.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2972740.1 Non Chatacterized Hit- tr|B6T0J3|B6T0J3_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4
SV=1,80.7,2e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.39556.1
(669 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67911 homologue to UniRef100_A7PG48 Cluster: Chromoso... 1302 0.0
gnl|LJGI|TC77636 similar to UniRef100_A7PG48 Cluster: Chromosome... 628 e-179
gnl|LJGI|DC597955 homologue to UniRef100_A7PG48 Cluster: Chromos... 293 7e-79
gnl|LJGI|AV773451 similar to UniRef100_A7PG48 Cluster: Chromosom... 188 3e-47
>gnl|LJGI|TC67911 homologue to UniRef100_A7PG48 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1200
Score = 1302 bits (657), Expect = 0.0
Identities = 666/669 (99%)
Strand = Plus / Plus
Query: 1 atggcaggtttcaccgccgaagatctgtccacaatcggaggaatcgccaccgtgtcgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 atggcaggtttcaccgccgaagatctgtccacaatcggaggaatcgccaccgtgtcgatc 215
Query: 61 ctgcattccttcattcctacacactggcttcctttctccatcgtgggtcgtgcccagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ctgcattccttcattcctacacactggcttcctttctccatcgtgggtcgtgcccagaaa 275
Query: 121 tggactctctccagaaccctcctcgtcactgcacttggagcaattttgcacgtaatatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tggactctctccagaaccctcctcgtcactgcacttggagcaattttgcacgtaatatcc 335
Query: 181 acttcactgcttgggataactgcaattaatatggcaaacaccattgctggtgaagaaaca 240
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 336 acttcactgcttggtataactgcaattactatggcaaacaccattgctggtgaagaaaca 395
Query: 241 gtccataagcttgcttcacttttgctcgtctttctcggtggtagttatgtcctattgttt 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gtgcataagcttgcttcacttttgctcgtctttctcggtggtagttatgtcctattgttt 455
Query: 301 tttatgggaaaaggcggccatagccattcacacaaccaacccatggagaaaatggctgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tttatgggaaaaggcggccatagccattcacacaaccaacccatggagaaaatggctgta 515
Query: 361 gctgggcttattcttgttccagcattgtctccttgtgctacaacacttccagtatttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gctgggcttattcttgttccagcattgtctccttgtgctacaacacttccagtatttctt 575
Query: 421 gctgtgggaagttcatcttccatgatggtgctcgcgatcatagtgctgctattcagcaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gctgtgggaagttcatcttccatgatggtgctcgcgatcatagtgctgctattcagcaca 635
Query: 481 atatctgtgatgacttcgctagtagcattgtcattttatggggcgagtcagctgaagttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 atatctgtgatgacttcgctagtagcattgtcattttatggggcgagtcagctgaagttt 695
Query: 541 cattgggtggagcgatatgacaaacttcttgttggttcagtactgtgtttagttggagtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 cattgggtggagcgatatgacaaacttcttgttggttcagtactgtgtttagttggagtt 755
Query: 601 ttgaccctaattttccatcatcatgatcatgatcatgaccacggaaaagttggttcagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ttgaccctaattttccatcatcatgatcatgatcatgaccacggaaaagttggttcagtt 815
Query: 661 ggagagcac 669
|||||||||
Sbjct: 816 ggagagcac 824
>gnl|LJGI|TC77636 similar to UniRef100_A7PG48 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (93%)
Length = 969
Score = 628 bits (317), Expect = e-179
Identities = 535/607 (88%), Gaps = 3/607 (0%)
Strand = Plus / Plus
Query: 31 acaatcggaggaatcgccaccgtgtcgatcctgcattccttcattcctacacactggctt 90
||||||||||||||||||||||| ||| | || |||||||||||||| || |||||||||
Sbjct: 172 acaatcggaggaatcgccaccgtttcgcttctccattccttcattcccacccactggctt 231
Query: 91 cctttctccatcgtgggtcgtgcccagaaatggactctctccagaaccctcctcgtcact 150
|| |||||||| || |||||||||||||| ||||||||||| ||||||| ||||| |||
Sbjct: 232 cccttctccattgtcggtcgtgcccagaagtggactctctcacgaacccttctcgttact 291
Query: 151 gcacttggagcaattttgcacgtaatatccacttcactgcttgggataactgcaattaat 210
||||| ||||||||||| |||||||||||||| |||| ||||| ||||| ||| | |
Sbjct: 292 gcactaggagcaattttacacgtaatatccacggcacttcttggtataacagcagtcacc 351
Query: 211 atggcaaacaccattgctggtgaagaaacagtccataagcttgcttcacttttgctcgtc 270
|||||||||||||||| |||||||||| |||| || |||||||| ||||||||||| ||
Sbjct: 352 atggcaaacaccattgttggtgaagaagcagttcacaagcttgcatcacttttgcttgtg 411
Query: 271 tttctcggtggtagttatgtcctattgttttttatgggaaaaggcggccatagccattca 330
||||| || ||||||||||| || |||||||| | ||||| || ||||||| |||||
Sbjct: 412 tttctaggcggtagttatgttctgttgtttttggttggaaagggtggccataatcattcg 471
Query: 331 cacaaccaacccatggagaaaatggctgtagctgggcttattcttgttccagcattgtct 390
||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 472 cacaaccaaccgatggagaaaatggctgttgctgggcttattcttgttcctgcattgtct 531
Query: 391 ccttgtgctacaacacttccagtatttcttgctgtgggaagttcatcttccatgatggtg 450
|||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||||||
Sbjct: 532 ccttgtgccacaacacttccagtatttcttgctgttggaaattcatctaccatgatggtg 591
Query: 451 ctcgcgatcatagtgctgctattcagcacaatatctgtgatgacttcgctagtagcattg 510
|| || ||||||||| |||||||||| |||||| ||||||||||||| || ||||| ||
Sbjct: 592 ctggctatcatagtgttgctattcagtacaataactgtgatgacttcactggtagcgtta 651
Query: 511 tcattttatggggcgagtcagctgaagtttcattgggtggagcgatatgacaaacttctt 570
||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||
Sbjct: 652 tcattctatggggccagtcagctgaagtttcactgggtagagcggtatgacaaactcctt 711
Query: 571 gttggttcagtactgtgtttagttggagttttgaccctaattttccatcatcatgatcat 630
|||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||
Sbjct: 712 gttggttcagtactgtgtttggttggagttttgaccctaatttt---tcatgatgatcat 768
Query: 631 gatcatg 637
||||||
Sbjct: 769 catcatg 775
>gnl|LJGI|DC597955 homologue to UniRef100_A7PG48 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 531
Score = 293 bits (148), Expect = 7e-79
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 1 atggcaggtttcaccgccgaagatctgtccacaatcggaggaatcgccaccgtgtcgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atggcaggtttcaccgccgaagatctgtccacaatcggaggaatcgccaccgtgtcgatc 266
Query: 61 ctgcattccttcattcctacacactggcttcctttctccatcgtgggtcgtgcccagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctgcattccttcattcctacacactggcttcctttctccatcgtgggtcgtgcccagaaa 326
Query: 121 tggactctctccagaaccctcctcgtca 148
||||||||||||||||||||||||||||
Sbjct: 327 tggactctctccagaaccctcctcgtca 354
>gnl|LJGI|AV773451 similar to UniRef100_A7PG48 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 488
Score = 188 bits (95), Expect = 3e-47
Identities = 257/301 (85%), Gaps = 10/301 (3%)
Strand = Plus / Minus
Query: 344 tggagaaaatggctgtagctgggcttattcttgttccagcattgtctccttgtgctacaa 403
|||||||||||||||| |||||||||| ||||||||| || |||||||||||| | |||
Sbjct: 431 tggagaaaatggctgttgctgggcttagtcttgttcctgccttgtctccttgtcccacac 372
Query: 404 ca-cttccagta-tttcttgctgtgggaagttcatcttccatga-tggtgctcgcgatca 460
|| ||||| ||| | ||||||||| |||| ||||||| |||||| ||||||| || ||||
Sbjct: 371 caccttcccgtactctcttgctgttggaaattcatctaccatgactggtgctggctatca 312
Query: 461 tagtgctgctattcagcacaatatctgtgatgacttcgctagtagcattgtcatttta-t 519
||||| |||||||||| || ||| ||||||||||||| | ||||| || ||||| || |
Sbjct: 311 tagtgttgctattcagtaccataactgtgatgacttcaatggtagcgttatcattctact 252
Query: 520 ggggcgagtca-gctgaagtttcattggg-tggagcgatatgacaaacttcttg-ttggt 576
||||| ||||| ||||||||||| |||| | ||||| ||||||||||| |||| |||||
Sbjct: 251 ggggccagtcaccctgaagtttcactgggctagagcggtatgacaaactccttgcttggt 192
Query: 577 tcagtactgtgtttagttggagttttgaccctaattttccatcatcatgatcatgatcat 636
||||||| |||||| ||||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 191 tcagtaccgtgtttggttggagttttgaccctaatttt---tcatgatgatcatcatcat 135
Query: 637 g 637
|
Sbjct: 134 g 134