Miyakogusa Predicted Gene
- Lj2g3v2948530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2948530.1 tr|G7K2W1|G7K2W1_MEDTR T-complex protein 1
subunit eta OS=Medicago truncatula GN=MTR_5g087560 PE=3
S,96.53,0,Cpn60_TCP1,Chaperonin Cpn60/TCP-1; GroEL apical
domain-like,NULL; GroEL equatorial domain-like,Chape,CUFF.39518.1
(1101 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO012546 homologue to UniRef100_Q0DA00 Cluster: Os06g06... 985 0.0
gnl|LJGI|TC70987 similar to UniRef100_Q0DA00 Cluster: Os06g06877... 666 0.0
gnl|LJGI|TC57819 similar to UniRef100_A9RUB6 Cluster: Predicted ... 323 1e-87
>gnl|LJGI|GO012546 homologue to UniRef100_Q0DA00 Cluster: Os06g0687700 protein; n=2;
Oryza sativa Japonica Group|Rep: Os06g0687700 protein -
Oryza sativa subsp. japonica (Rice), partial (53%)
Length = 659
Score = 985 bits (497), Expect = 0.0
Identities = 500/501 (99%)
Strand = Plus / Plus
Query: 577 gagcgaagtctgcatgatgcgatcatgatagttagaagggctttgaaaaattcaactgta 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagcgaagtctgcatgatgcgatcatgatagttagaagggctttgaaaaattcaactgta 60
Query: 637 gttgctggtggaggtgctatagatatggaaattagccggtacctgaggcagcatgcgcgt 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgctggtggaggtgctatagatatggaaattagccggtacctgaggcagcatgcgcgt 120
Query: 697 acaatagcagggaagtctcagcttttcatcaactcgtatgcaaaagctcttgaggttata 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaatagcagggaagtctcagcttttcatcaactcgtatgcaaaagctcttgaggttata 180
Query: 757 cctaggcaattatgtgacaatgcaggatttgatgcaactgatgtgctgaacaaattaagg 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctaggcaattatgtgacaatgcaggatttgatgcaactgatgtgctgaacaaattaagg 240
Query: 817 cagaaacacgcgcttccttctggtgagggggcaccatatggagtggatataaacactggt 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagaaacacgcgcttccttctggtgagggggcaccatatggagtggatataaacactggt 300
Query: 877 ggaattgctgactcttttgctaactttgtctgggagcctgcagttgtaaagatcaatgct 936
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaattgccgactcttttgctaactttgtctgggagcctgcagttgtaaagatcaatgct 360
Query: 937 ataaatgctgctacggaggctgcttgccttgtcttaagcgtggatgaaacagttaaaaat 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ataaatgctgctacggaggctgcttgccttgtcttaagcgtggatgaaacagttaaaaat 420
Query: 997 cccaagtcggagagtgcgcaaggagaggctgcagcaagtgccatgggaggcagaggtcgc 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cccaagtcggagagtgcgcaaggagaggctgcagcaagtgccatgggaggcagaggtcgc 480
Query: 1057 ggaggtggtttccgtggtcga 1077
|||||||||||||||||||||
Sbjct: 481 ggaggtggtttccgtggtcga 501
>gnl|LJGI|TC70987 similar to UniRef100_Q0DA00 Cluster: Os06g0687700 protein; n=2; Oryza
sativa Japonica Group|Rep: Os06g0687700 protein - Oryza
sativa subsp. japonica (Rice), partial (36%)
Length = 824
Score = 666 bits (336), Expect = 0.0
Identities = 342/344 (99%)
Strand = Plus / Plus
Query: 758 ctaggcaattatgtgacaatgcaggatttgatgcaactgatgtgctgaacaaattaaggc 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaggcaattatgtgacaatgcaggatttgatgcaactgatgtgctgaacaaattaaggc 60
Query: 818 agaaacacgcgcttccttctggtgagggggcaccatatggagtggatataaacactggtg 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaacacgcgcttccttctggtgagggggcaccatatggagtggatataaacactggtg 120
Query: 878 gaattgctgactcttttgctaactttgtctgggagcctgcagttgtaaagatcaatgcta 937
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 gaattgctgactcttttgctaactttgtctgggagcctgcacttgtaaagatcaatgcta 180
Query: 938 taaatgctgctacggaggctgcttgccttgtcttaagcgtggatgaaacagttaaaaatc 997
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 taaatgctgctacggaggctgcttgccttgtcttaagcgtggatgaaacagttacaaatc 240
Query: 998 ccaagtcggagagtgcgcaaggagaggctgcagcaagtgccatgggaggcagaggtcgcg 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaagtcggagagtgcgcaaggagaggctgcagcaagtgccatgggaggcagaggtcgcg 300
Query: 1058 gaggtggtttccgtggtcgaggacgaggaatgcgtagatgatga 1101
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaggtggtttccgtggtcgaggacgaggaatgcgtagatgatga 344
>gnl|LJGI|TC57819 similar to UniRef100_A9RUB6 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(44%)
Length = 857
Score = 323 bits (163), Expect = 1e-87
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 1 atgattggaattaagaaggttcctggtggtaccatgcgggactcgtttctagtaaatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 atgattggaattaagaaggttcctggtggtaccatgcgggactcgtttctagtaaatggt 754
Query: 61 gttgcgttcaagaagacattttcatatgctgggtttgagcaacagcccaaaaagttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gttgcgttcaagaagacattttcatatgctgggtttgagcaacagcccaaaaagttttta 814
Query: 121 aatccaaaaatactattacttaatgttgagttggagctaaaat 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 aatccaaaaatactattacttaatgttgagttggagctaaaat 857