Miyakogusa Predicted Gene
- Lj2g3v2905060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2905060.1 tr|Q0IS21|Q0IS21_ORYSJ Os11g0573200 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os11g05732,43.75,0.00000000000001,zinc finger,Zinc finger,
CCHC-type; Retrovirus zinc finger-like domains,Zinc finger, CCHC-type;
zf-C,CUFF.39487.1
(984 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS323094 similar to UniRef100_A9V4U6 Cluster: Predicted... 1090 0.0
gnl|LJGI|TC66528 similar to UniRef100_A7PG94 Cluster: Chromosome... 66 4e-10
>gnl|LJGI|FS323094 similar to UniRef100_A9V4U6 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga brevicollis MX1, partial (12%)
Length = 711
Score = 1090 bits (550), Expect = 0.0
Identities = 568/574 (98%)
Strand = Plus / Plus
Query: 1 atgatgaagaacacagaggaggaggatgcgatcatctcgacgaagaagcagcagctcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 atgatgaagaacacagaggaggaggatgcgatcatctcgacgaagaagcagcagctcatg 84
Query: 61 catgctcctaacgcggaaaacagcgtcgtattggaccaaccgagaggagtagcactttcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 catgctcctaacgcggaaaacagcgtcgtattggaccaaccgagaggagtagcactttcg 144
Query: 121 gaagcaacaatagcatataaattgaggaaaaggaagaagagtaggaagaagaagaagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gaagcaacaatagcatataaattgaggaaaaggaagaagagtaggaagaagaagaagttg 204
Query: 181 gaatctggcgttcagaatgtagcttgtaaatctcaaagggattttttagttcaagaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaatctggcgttcagaatgtagcttgtaaatctcaaagggattttttagttcaagaagag 264
Query: 241 gttgtggagcctatggaagccggcactgttctggtgagtgacaatcagcccgtttggagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttgtggagcctatggaagccggcactgttctggtgagtgacaatcagcccgtttggagt 324
Query: 301 ggagtcgcactttcagaagcaatggaagaatatagtgagggggaaaagtctcagaaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggagtcgcactttcagaagcaatggaagaatatagtgagggggaaaagtctcagaaaaat 384
Query: 361 atgaggaaaaggaagaggaggaagaagttggaatctagtgttcagaaggcttttttagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgaggaaaaggaagaggaggaagaagttggaatctagtgttcagaaggcttttttagtt 444
Query: 421 caagaagagggtgtggatgagactatcaaaggcacagagaaaatggagcctacagaagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caagaagagggtgtggatgagactatcaaaggcacagagaaaatggagcctacagaagcc 504
Query: 481 ggcactgttcaggctgttttatttcaagaagaggctgttgagactatcaaaggcacacaa 540
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 505 ggcactgttcaggctgttttatttcaagaagaggctgtgaagactatcaaaggcacatag 564
Query: 541 aaaatggagccttcggaagcaggcactgttcaga 574
|||||||||| | |||||||||||||||||||||
Sbjct: 565 aaaatggagcatacggaagcaggcactgttcaga 598
Score = 230 bits (116), Expect = 1e-59
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 510 agaggctgttgagactatcaaaggcacacaaaaaatggagccttcggaagcaggcactgt 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 agaggctgttgagactatcaaaggcacacaaaaaatggagccttcggaagcaggcactgt 655
Query: 570 tcagatgagtgacaatgtggttctgcgaaagttgcttcggggtccgaggtattatg 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tcagatgagtgacaatgtggttctgcgaaagttgcttcggggtccgaggtattatg 711
Score = 69.9 bits (35), Expect = 3e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 438 tgagactatcaaaggcacagagaaaatggagcctacagaagccggcactgttcag 492
||||||||||||||||||| | |||||||||||| | ||||| ||||||||||||
Sbjct: 605 tgagactatcaaaggcacacaaaaaatggagccttcggaagcaggcactgttcag 659
>gnl|LJGI|TC66528 similar to UniRef100_A7PG94 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 846
Score = 65.9 bits (33), Expect = 4e-10
Identities = 86/103 (83%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 587 tggttctgcgaaagttgcttcggggtccgaggtattatgatcctccggcagactgtggtt 646
|||||||||||||| ||||||||||||| ||||||| |||||| | |||| || |||
Sbjct: 453 tggttctgcgaaagctgcttcggggtccaaggtattttgatcccc---cagatagtagtt 509
Query: 647 gggaaacatgctataattgcggtgaagaaggccatgctactgt 689
||| | ||||||||||||| || || ||||| |||||| ||||
Sbjct: 510 ggggagcatgctataattgtggggaggaaggtcatgctgctgt 552