Miyakogusa Predicted Gene
- Lj2g3v2904930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2904930.1 tr|A9T1C3|A9T1C3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_190638,53.93,7e-18,Ribosomal_L30,Ribosomal protein L30,
ferredoxin-like fold domain;
Ribosomal_L30_ferredoxin-like,Ribo,CUFF.39492.1
(324 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO040366 weakly similar to UniRef100_Q6ZC61 Cluster: Ri... 642 0.0
gnl|LJGI|TC64209 weakly similar to UniRef100_Q6ZC61 Cluster: Rib... 642 0.0
gnl|LJGI|TC76668 similar to UniRef100_A7PX82 Cluster: Chromosome... 626 e-179
gnl|LJGI|TC64240 weakly similar to UniRef100_Q6ZC61 Cluster: Rib... 626 e-179
>gnl|LJGI|GO040366 weakly similar to UniRef100_Q6ZC61 Cluster: Ribosomal protein L30p
family-like; n=1; Oryza sativa Japonica Group|Rep:
Ribosomal protein L30p family-like - Oryza sativa subsp.
japonica (Rice), partial (84%)
Length = 910
Score = 642 bits (324), Expect = 0.0
Identities = 324/324 (100%)
Strand = Plus / Minus
Query: 1 atgaatgcatttaaggcatacaaagcatgtgtcccaattgcttggagcccaaatctctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 atgaatgcatttaaggcatacaaagcatgtgtcccaattgcttggagcccaaatctctat 419
Query: 61 ataactctggtgaggggcattccagggaccaggaggctccacagacgcactttggaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ataactctggtgaggggcattccagggaccaggaggctccacagacgcactttggaagca 359
Query: 121 ctacgcctgggaaaatgcaatcgaactgtcatgcgatggaacacgcctactgttagggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ctacgcctgggaaaatgcaatcgaactgtcatgcgatggaacacgcctactgttagggga 299
Query: 181 atgctccaacaggtcaagaggctagttgtcattgagacagaggagatgtacaaggcccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atgctccaacaggtcaagaggctagttgtcattgagacagaggagatgtacaaggcccgc 239
Query: 241 aaacagaaggaggaagcccaccgagctctgcgtcctccattggtcataaatcatcaaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aaacagaaggaggaagcccaccgagctctgcgtcctccattggtcataaatcatcaaccg 179
Query: 301 tcttcggctactggtaccttataa 324
||||||||||||||||||||||||
Sbjct: 178 tcttcggctactggtaccttataa 155
>gnl|LJGI|TC64209 weakly similar to UniRef100_Q6ZC61 Cluster: Ribosomal protein L30p
family-like; n=1; Oryza sativa Japonica Group|Rep:
Ribosomal protein L30p family-like - Oryza sativa subsp.
japonica (Rice), partial (84%)
Length = 684
Score = 642 bits (324), Expect = 0.0
Identities = 324/324 (100%)
Strand = Plus / Plus
Query: 1 atgaatgcatttaaggcatacaaagcatgtgtcccaattgcttggagcccaaatctctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atgaatgcatttaaggcatacaaagcatgtgtcccaattgcttggagcccaaatctctat 141
Query: 61 ataactctggtgaggggcattccagggaccaggaggctccacagacgcactttggaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ataactctggtgaggggcattccagggaccaggaggctccacagacgcactttggaagca 201
Query: 121 ctacgcctgggaaaatgcaatcgaactgtcatgcgatggaacacgcctactgttagggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctacgcctgggaaaatgcaatcgaactgtcatgcgatggaacacgcctactgttagggga 261
Query: 181 atgctccaacaggtcaagaggctagttgtcattgagacagaggagatgtacaaggcccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atgctccaacaggtcaagaggctagttgtcattgagacagaggagatgtacaaggcccgc 321
Query: 241 aaacagaaggaggaagcccaccgagctctgcgtcctccattggtcataaatcatcaaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaacagaaggaggaagcccaccgagctctgcgtcctccattggtcataaatcatcaaccg 381
Query: 301 tcttcggctactggtaccttataa 324
||||||||||||||||||||||||
Sbjct: 382 tcttcggctactggtaccttataa 405
>gnl|LJGI|TC76668 similar to UniRef100_A7PX82 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 1469
Score = 626 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Minus
Query: 1 atgaatgcatttaaggcatacaaagcatgtgtcccaattgcttggagcccaaatctctat 60
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 atgaatgcattcaaggcataccaagcatgtgtcccaattgcttggagcccaaatctctat 1325
Query: 61 ataactctggtgaggggcattccagggaccaggaggctccacagacgcactttggaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 ataactctggtgaggggcattccagggaccaggaggctccacagacgcactttggaagca 1265
Query: 121 ctacgcctgggaaaatgcaatcgaactgtcatgcgatggaacacgcctactgttagggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 ctacgcctgggaaaatgcaatcgaactgtcatgcgatggaacacgcctactgttagggga 1205
Query: 181 atgctccaacaggtcaagaggctagttgtcattgagacagaggagatgtacaaggcccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 atgctccaacaggtcaagaggctagttgtcattgagacagaggagatgtacaaggcccgc 1145
Query: 241 aaacagaaggaggaagcccaccgagctctgcgtcctccattggtcataaatcatcaaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 aaacagaaggaggaagcccaccgagctctgcgtcctccattggtcataaatcatcaaccg 1085
Query: 301 tcttcggctactggtaccttataa 324
||||||||||||||||||||||||
Sbjct: 1084 tcttcggctactggtaccttataa 1061
>gnl|LJGI|TC64240 weakly similar to UniRef100_Q6ZC61 Cluster: Ribosomal protein L30p
family-like; n=1; Oryza sativa Japonica Group|Rep:
Ribosomal protein L30p family-like - Oryza sativa subsp.
japonica (Rice), partial (84%)
Length = 1041
Score = 626 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Plus
Query: 1 atgaatgcatttaaggcatacaaagcatgtgtcccaattgcttggagcccaaatctctat 60
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 462 atgaatgcattcaaggcataccaagcatgtgtcccaattgcttggagcccaaatctctat 521
Query: 61 ataactctggtgaggggcattccagggaccaggaggctccacagacgcactttggaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ataactctggtgaggggcattccagggaccaggaggctccacagacgcactttggaagca 581
Query: 121 ctacgcctgggaaaatgcaatcgaactgtcatgcgatggaacacgcctactgttagggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ctacgcctgggaaaatgcaatcgaactgtcatgcgatggaacacgcctactgttagggga 641
Query: 181 atgctccaacaggtcaagaggctagttgtcattgagacagaggagatgtacaaggcccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 atgctccaacaggtcaagaggctagttgtcattgagacagaggagatgtacaaggcccgc 701
Query: 241 aaacagaaggaggaagcccaccgagctctgcgtcctccattggtcataaatcatcaaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aaacagaaggaggaagcccaccgagctctgcgtcctccattggtcataaatcatcaaccg 761
Query: 301 tcttcggctactggtaccttataa 324
||||||||||||||||||||||||
Sbjct: 762 tcttcggctactggtaccttataa 785