Miyakogusa Predicted Gene
- Lj2g3v2904900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2904900.1 Non Chatacterized Hit- tr|B9SH54|B9SH54_RICCO
Oligopeptide transporter, putative OS=Ricinus
communis,68.71,0,PTR2,Proton-dependent oligopeptide transporter
family; seg,NULL; OLIGOPEPTIDE TRANSPORTER-RELATED,NU,CB828533.path2.1
(452 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB828533 weakly similar to UniRef100_Q8LG02 Cluster: Ni... 864 0.0
gnl|LJGI|CB828531 similar to UniRef100_A7PX82 Cluster: Chromosom... 527 e-149
gnl|LJGI|TC70680 weakly similar to UniRef100_Q8LG02 Cluster: Nit... 335 1e-91
gnl|LJGI|TC63579 similar to UniRef100_Q8LG02 Cluster: Nitrate tr... 176 8e-44
gnl|LJGI|AU251978 similar to UniRef100_A7PX82 Cluster: Chromosom... 127 6e-29
gnl|LJGI|GO020543 similar to UniRef100_A7PX82 Cluster: Chromosom... 70 1e-11
>gnl|LJGI|CB828533 weakly similar to UniRef100_Q8LG02 Cluster: Nitrate transporter;
n=1; Arabidopsis thaliana|Rep: Nitrate transporter -
Arabidopsis thaliana (Mouse-ear cress), partial (29%)
Length = 530
Score = 864 bits (436), Expect = 0.0
Identities = 448/452 (99%)
Strand = Plus / Plus
Query: 1 atgtgtttgttaactggggctacgaccattccaagcatgaagtcccctccatgcagtagt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 79 atgtgtttgttaactggggctacgaccattccaagcatgaaggcccctccatgcagtagt 138
Query: 61 gtccaaagacaacaccatgaatgccttgaggccggtggcaaacaagtggctctactattg 120
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 139 gtccaaagacaacaccatgaatgcattgaggccagtggcaaacaagtggctctactattg 198
Query: 121 gtagccctgtataccatagctgtgggtgctggaggagtaaaatccagtgtctctggtttt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 199 gtagccctgtataccatagctgtgggtgctggaggaataaaatccagtgtctctggtttt 258
Query: 181 ggatcagatcagtttgatacaacagacccccgggaagagaagaagatggtctttttcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggatcagatcagtttgatacaacagacccccgggaagagaagaagatggtctttttcttc 318
Query: 241 aataggttctatttctttgtcagtactggttccttattttctgtgctagtgttggtgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aataggttctatttctttgtcagtactggttccttattttctgtgctagtgttggtgtat 378
Query: 301 gtgcaagacaacataggaagagggtggggatttggaattccagcaggaataatgttggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtgcaagacaacataggaagagggtggggatttggaattccagcaggaataatgttggtt 438
Query: 361 tcacttgcttttttactctatggtaaaccgttgtatcgatataagagaccacaagggagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tcacttgcttttttactctatggtaaaccgttgtatcgatataagagaccacaagggagc 498
Query: 421 cctttaacacttatatggaaggtattaatctt 452
||||||||||||||||||||||||||||||||
Sbjct: 499 cctttaacacttatatggaaggtattaatctt 530
>gnl|LJGI|CB828531 similar to UniRef100_A7PX82 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 538
Score = 527 bits (266), Expect = e-149
Identities = 278/282 (98%)
Strand = Plus / Plus
Query: 1 atgtgtttgttaactggggctacgaccattccaagcatgaagtcccctccatgcagtagt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 257 atgtgtttgttaactggggctacgaccattccaagcatgaaggcccctccatgcagtagt 316
Query: 61 gtccaaagacaacaccatgaatgccttgaggccggtggcaaacaagtggctctactattg 120
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 317 gtccaaagacaacaccatgaatgcattgaggccagtggcaaacaagtggctctactattg 376
Query: 121 gtagccctgtataccatagctgtgggtgctggaggagtaaaatccagtgtctctggtttt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 377 gtagccctgtataccatagctgtgggtgctggaggaataaaatccagtgtctctggtttt 436
Query: 181 ggatcagatcagtttgatacaacagacccccgggaagagaagaagatggtctttttcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggatcagatcagtttgatacaacagacccccgggaagagaagaagatggtctttttcttc 496
Query: 241 aataggttctatttctttgtcagtactggttccttattttct 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aataggttctatttctttgtcagtactggttccttattttct 538
>gnl|LJGI|TC70680 weakly similar to UniRef100_Q8LG02 Cluster: Nitrate transporter;
n=1; Arabidopsis thaliana|Rep: Nitrate transporter -
Arabidopsis thaliana (Mouse-ear cress), partial (27%)
Length = 558
Score = 335 bits (169), Expect = 1e-91
Identities = 181/185 (97%)
Strand = Plus / Plus
Query: 1 atgtgtttgttaactggggctacgaccattccaagcatgaagtcccctccatgcagtagt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 374 atgtgtttgttaactggggctacgaccattccaagcatgaaggcccctccatgcagtagt 433
Query: 61 gtccaaagacaacaccatgaatgccttgaggccggtggcaaacaagtggctctactattg 120
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 434 gtccaaagacaacaccatgaatgcattgaggccagtggcaaacaagtggctctactattg 493
Query: 121 gtagccctgtataccatagctgtgggtgctggaggagtaaaatccagtgtctctggtttt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 494 gtagccctgtataccatagctgtgggtgctggaggaataaaatccagtgtctctggtttt 553
Query: 181 ggatc 185
|||||
Sbjct: 554 ggatc 558
>gnl|LJGI|TC63579 similar to UniRef100_Q8LG02 Cluster: Nitrate transporter; n=1;
Arabidopsis thaliana|Rep: Nitrate transporter -
Arabidopsis thaliana (Mouse-ear cress), partial (39%)
Length = 1174
Score = 176 bits (89), Expect = 8e-44
Identities = 260/317 (82%)
Strand = Plus / Plus
Query: 44 cccctccatgcagtagtgtccaaagacaacaccatgaatgccttgaggccggtggcaaac 103
|||||||||||||| ||| ||||||||||||||| ||| |||||||| |||||||||
Sbjct: 587 cccctccatgcagtgcagtcagaagacaacaccatgagtgcattgaggccagtggcaaac 646
Query: 104 aagtggctctactattggtagccctgtataccatagctgtgggtgctggaggagtaaaat 163
| | || | ||||| | |||||| || |||||||| ||||||| |||||| ||||||
Sbjct: 647 agttatctttgctatttgcagccctttacaccatagcagtgggtggtggagggataaaat 706
Query: 164 ccagtgtctctggttttggatcagatcagtttgatacaacagacccccgggaagagaaga 223
||| |||||| || |||||||| |||||||| || | |||||| ||| ||| || | ||
Sbjct: 707 ccaatgtctcaggctttggatctgatcagttagagataacagatcccaaggaggaaagga 766
Query: 224 agatggtctttttcttcaataggttctatttctttgtcagtactggttccttattttctg 283
| ||| |||||| |||||| || ||||| |||||| |||| | || |||||||| ||||
Sbjct: 767 atatgatcttttgcttcaacagattctacttctttatcaggatcgggtccttattctctg 826
Query: 284 tgctagtgttggtgtatgtgcaagacaacataggaagagggtggggatttggaattccag 343
|| ||||| |||| ||||||||||||| |||||||||||||||||||| ||||||| |||
Sbjct: 827 tgatagtgctggtatatgtgcaagacaccataggaagagggtggggatatggaattgcag 886
Query: 344 caggaataatgttggtt 360
|||| ||||| ||||
Sbjct: 887 gtggaacaatgtgggtt 903
>gnl|LJGI|AU251978 similar to UniRef100_A7PX82 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 381
Score = 127 bits (64), Expect = 6e-29
Identities = 116/132 (87%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 230 tctttttcttcaatagg-ttctatttctttgtcagtactggttccttattttctgtgcta 288
||||||||||||| || ||||| |||||| |||||| ||| |||||||| |||||| ||
Sbjct: 39 tctttttcttcaacagaattctacttctttatcagtattgggtccttattctctgtgata 98
Query: 289 gtgttggtgtatgtgcaagacaacataggaagagggtggggatttggaattccagcagga 348
||| |||| |||||||||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct: 99 gtgctggtatatgtgcaagacaacataggaagagggtggggatatggaatttcaggtgga 158
Query: 349 ataatgttggtt 360
| ||||||||||
Sbjct: 159 acaatgttggtt 170
>gnl|LJGI|GO020543 similar to UniRef100_A7PX82 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 726
Score = 69.9 bits (35), Expect = 1e-11
Identities = 133/163 (81%), Gaps = 2/163 (1%)
Strand = Plus / Plus
Query: 44 cccctccatgcagtagtgtccaaagacaacaccatgaatgccttgaggccggtggcaaac 103
|||||||||||||| ||| ||||||||||||||| ||| |||||||| |||||||||
Sbjct: 563 cccctccatgcagtgcagtcagaagacaacaccatgagtgcattgaggccagtggcaaac 622
Query: 104 aagtggctctactattggtagccctgtataccatagctgtgggtgctggaggagtaaaat 163
| | || | ||||| | |||||| || |||||||| ||||||| |||||| | ||||
Sbjct: 623 agttatctttgctatttgcagccctttacaccatagcagtgggtggtggagg-gataaat 681
Query: 164 ccagtgtctctggttttggatcagatcagtttgatacaacaga 206
||| |||||| | |||||||| ||||||||||| | ||||||
Sbjct: 682 ccaatgtctc-agctttggatctgatcagtttgacataacaga 723