Miyakogusa Predicted Gene
- Lj2g3v2902390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2902390.1 Non Chatacterized Hit- tr|J3MDU3|J3MDU3_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB06G2,34.78,1e-16,SUBFAMILY NOT NAMED,NULL; C1ORF73 PROTEIN,NULL;
ARM repeat,Armadillo-type fold,CUFF.39426.1
(1071 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78247 weakly similar to UniRef100_A7PA70 Cluster: Chr... 716 0.0
gnl|LJGI|TC70411 weakly similar to UniRef100_A7PA70 Cluster: Chr... 333 1e-90
gnl|LJGI|BW595047 170 1e-41
>gnl|LJGI|TC78247 weakly similar to UniRef100_A7PA70 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 463
Score = 716 bits (361), Expect = 0.0
Identities = 364/365 (99%)
Strand = Plus / Plus
Query: 707 agataggtctacagttgatattaaattcttcaaatgaagatcttttggtagctatgctat 766
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4 agataggtctacagttgatattaaattcttcaaatgaagatcttttggtggctatgctat 63
Query: 767 tctcactttcaaaactggcttctgtttctacagttctagcctccaatgaggtggactttc 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tctcactttcaaaactggcttctgtttctacagttctagcctccaatgaggtggactttc 123
Query: 827 tactatcatttgtcaagcgagaagtagcttcacatgtacaagaaacagcatcaaaatgca 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tactatcatttgtcaagcgagaagtagcttcacatgtacaagaaacagcatcaaaatgca 183
Query: 887 tacattatctattaaaaaataatcctgctctaaagctttattgtaatgcgtcctttgagc 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tacattatctattaaaaaataatcctgctctaaagctttattgtaatgcgtcctttgagc 243
Query: 947 tcccagatggacagaccctacaacacccaccctctgaagatcaagcttggaaagatgatt 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tcccagatggacagaccctacaacacccaccctctgaagatcaagcttggaaagatgatt 303
Query: 1007 ggagaaatgatgaaatagtagaactgaagaatttgttttcggatttggaagcacctttat 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggagaaatgatgaaatagtagaactgaagaatttgttttcggatttggaagcacctttat 363
Query: 1067 aaata 1071
|||||
Sbjct: 364 aaata 368
>gnl|LJGI|TC70411 weakly similar to UniRef100_A7PA70 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 539
Score = 333 bits (168), Expect = 1e-90
Identities = 168/168 (100%)
Strand = Plus / Minus
Query: 1 atggaaccaacttgtgctgcttgtgccatggaatggagcatccaacttgagaagggcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atggaaccaacttgtgctgcttgtgccatggaatggagcatccaacttgagaagggcctc 109
Query: 61 cgttctagtaaaccaggtgtacctgtcaaaaccatattgaaattggggccccaccttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 cgttctagtaaaccaggtgtacctgtcaaaaccatattgaaattggggccccaccttcag 49
Query: 121 ctatggagtagagagttcgagtctggtattgattccaatgccatattt 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 ctatggagtagagagttcgagtctggtattgattccaatgccatattt 1
>gnl|LJGI|BW595047
Length = 271
Score = 170 bits (86), Expect = 1e-41
Identities = 95/98 (96%)
Strand = Plus / Plus
Query: 974 caccctctgaagatcaagcttggaaagatgattggagaaatgatgaaatagtagaactga 1033
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4 caccctctgaagatcaagcttggaaagatgattggagagatgatgaaatagtagaactga 63
Query: 1034 agaatttgttttcggatttggaagcacctttataaata 1071
||||||||||| ||||||||||||||||| ||||||||
Sbjct: 64 agaatttgtttccggatttggaagcacctctataaata 101