Miyakogusa Predicted Gene

Lj2g3v2889670.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2889670.1 Non Chatacterized Hit- tr|I1JIK0|I1JIK0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,92.36,0,seg,NULL;
SODIUM-DEPENDENT VITAMIN C TRANSPORTER,NULL; XANTHINE-URACIL / VITAMIN
C PERMEASE FAMILY M,CUFF.39396.1
         (474 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69548 homologue to UniRef100_A7PX86 Cluster: Chromoso...   125   3e-28
gnl|LJGI|FS355114 similar to UniRef100_A7QDI4 Cluster: Chromosom...    86   2e-16

>gnl|LJGI|TC69548 homologue to UniRef100_A7PX86 Cluster: Chromosome chr12
           scaffold_36, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 580

 Score =  125 bits (63), Expect = 3e-28
 Identities = 69/71 (97%)
 Strand = Plus / Plus

                                                                       
Query: 404 gaggagacaatagaaatgaagagttctacactttgccatttaatctcaacaggttctttc 463
           |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4   gaggagacgatagcaatgaagagttctacactttgccatttaatctcaacaggttctttc 63

                      
Query: 464 cacctacttga 474
           |||||||||||
Sbjct: 64  cacctacttga 74


>gnl|LJGI|FS355114 similar to UniRef100_A7QDI4 Cluster: Chromosome chr10 scaffold_81,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_81, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 617

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                       
Query: 21  aggaaagtttggagctgtgtttgcatctatacccttccctatatttgctgctctatactg 80
           |||||| ||||||||| | |||||||| |||||||||||  | |||||||||  ||||||
Sbjct: 610 aggaaaatttggagctttatttgcatcaatacccttccccgtttttgctgctgcatactg 551

                                                                       
Query: 81  cattctctttggccttgtggcttcagttggaatatcatttcttcagttcacaaacttgaa 140
             | || ||||||||||||||||| || ||| |||||||| | |||||||| ||| ||||
Sbjct: 550 tgtcctatttggccttgtggcttctgtgggactatcatttttgcagttcactaacatgaa 491

              
Query: 141 ctc 143
           |||
Sbjct: 490 ctc 488