Miyakogusa Predicted Gene

Lj2g3v2879490.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2879490.2 Non Chatacterized Hit- tr|D8UAV0|D8UAV0_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,56.76,0.00000000000005,UNCHARACTERIZED,NULL; DUF423,Protein of
unknown function DUF423,CUFF.39482.2
         (339 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67932 similar to UniRef100_Q75LL8 Cluster: Expressed ...   656   0.0  

>gnl|LJGI|TC67932 similar to UniRef100_Q75LL8 Cluster: Expressed protein; n=1; Oryza
           sativa Japonica Group|Rep: Expressed protein - Oryza
           sativa subsp. japonica (Rice), partial (92%)
          Length = 638

 Score =  656 bits (331), Expect = 0.0
 Identities = 338/339 (99%), Gaps = 1/339 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatcctcatctctggcacaaagtggctgcgatttcaggagttgcagcacttggattg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42  atggatcctcatctctggcacaaagtggctgcgatttcaggagttgcagcacttggattg 101

                                                                       
Query: 61  ggcacctatggcgcccacggcttcaagccgcaaaacccatcttacaaagaggtttggcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 102 ggcacctatggcgcccacggcttcaagccgcaaaacccatcttacaa-gaggtttggcat 160

                                                                       
Query: 121 acagcatctctttatcatttggttcacacagctgccttacttgctgctccaatcacaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 acagcatctctttatcatttggttcacacagctgccttacttgctgctccaatcacaaaa 220

                                                                       
Query: 181 caccccaatgcttttggaggccttctaacagctgggatcgtggctttctctgggacgtgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 caccccaatgcttttggaggccttctaacagctgggatcgtggctttctctgggacgtgt 280

                                                                       
Query: 241 tatactgtggcatttcttgaggacagaaaatattcaaccttggctccatttggtggcttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tatactgtggcatttcttgaggacagaaaatattcaaccttggctccatttggtggcttt 340

                                                  
Query: 301 gcatttatagcagcttggggtagcttgtttttctgatga 339
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gcatttatagcagcttggggtagcttgtttttctgatga 379