Miyakogusa Predicted Gene
- Lj2g3v2878360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2878360.1 Non Chatacterized Hit- tr|I3SY67|I3SY67_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.81,0,seg,NULL;
ADH_SHORT,Short-chain dehydrogenase/reductase, conserved site;
SUBFAMILY NOT NAMED,NULL;
F,NODE_52141_length_724_cov_175.892258.path1.1
(684 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58820 similar to UniRef100_A7R0Z8 Cluster: Chromosome... 1356 0.0
gnl|LJGI|TC67395 similar to UniRef100_A7R0Z8 Cluster: Chromosome... 1279 0.0
gnl|LJGI|GO010191 similar to UniRef100_A7R0Z8 Cluster: Chromosom... 256 2e-67
gnl|LJGI|GO025907 similar to UniRef100_A7R0Z8 Cluster: Chromosom... 161 7e-39
gnl|LJGI|BP047644 similar to UniRef100_A7PCF5 Cluster: Chromosom... 151 7e-36
gnl|LJGI|FS328260 similar to UniRef100_Q1H445 Cluster: Transcrip... 68 8e-11
gnl|LJGI|GO012595 similar to UniRef100_A7R0Z8 Cluster: Chromosom... 64 1e-09
gnl|LJGI|TC64446 similar to UniRef100_A6WBM5 Cluster: Transcript... 56 3e-07
gnl|LJGI|TC68359 similar to UniRef100_Q0D4Y2 Cluster: Os07g05973... 54 1e-06
>gnl|LJGI|TC58820 similar to UniRef100_A7R0Z8 Cluster: Chromosome undetermined
scaffold_332, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_332,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (87%)
Length = 830
Score = 1356 bits (684), Expect = 0.0
Identities = 684/684 (100%)
Strand = Plus / Plus
Query: 1 atggaaataccgaaaaggtttcgaggcaaggtggcgatcgtgaccgcttccacccaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atggaaataccgaaaaggtttcgaggcaaggtggcgatcgtgaccgcttccacccaggga 184
Query: 61 attggcttcagcatagctgagaggcttggcttggaaggtgcatctgttgtcatctcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 attggcttcagcatagctgagaggcttggcttggaaggtgcatctgttgtcatctcttct 244
Query: 121 cgcaaacagcaaaatgttgatgcggctgcggaaaaactcagggctaaaggaattgatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cgcaaacagcaaaatgttgatgcggctgcggaaaaactcagggctaaaggaattgatgtg 304
Query: 181 ttagcagttgtttgccatgtttctaatgctcaacaaaggaagaatttgattgacaaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttagcagttgtttgccatgtttctaatgctcaacaaaggaagaatttgattgacaaaact 364
Query: 241 gtgcagaagtatggcaagatagatgttgttgtgtccaatgctgctgcgaatccttctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtgcagaagtatggcaagatagatgttgttgtgtccaatgctgctgcgaatccttctgtt 424
Query: 301 gatgccattctgcaaacaaaggacacggttcttgacaagttatgggagataaatgtcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gatgccattctgcaaacaaaggacacggttcttgacaagttatgggagataaatgtcaaa 484
Query: 361 gcctctatacttcttctcaaggatgcagctcctcacatgcagaaaggttcttctgtagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gcctctatacttcttctcaaggatgcagctcctcacatgcagaaaggttcttctgtagtt 544
Query: 421 atcatttcctcaattgctggttataacccaccacctgctatggctatgtatggagtaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atcatttcctcaattgctggttataacccaccacctgctatggctatgtatggagtaacc 604
Query: 481 aaaacagcccttctaggacttaccaaagccctggctggtgagatggccccgaacactcgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aaaacagcccttctaggacttaccaaagccctggctggtgagatggccccgaacactcgt 664
Query: 541 gtaaactgtgttgctcctggttttgtgccaactaattttgcatcattcattaccagtaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gtaaactgtgttgctcctggttttgtgccaactaattttgcatcattcattaccagtaat 724
Query: 601 gatgctatgagacaggaacttgaagggaagacaatacttggaaggcttggcacaactgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gatgctatgagacaggaacttgaagggaagacaatacttggaaggcttggcacaactgaa 784
Query: 661 gacatggctgctgctacagctttt 684
||||||||||||||||||||||||
Sbjct: 785 gacatggctgctgctacagctttt 808
>gnl|LJGI|TC67395 similar to UniRef100_A7R0Z8 Cluster: Chromosome undetermined
scaffold_332, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_332,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (90%)
Length = 964
Score = 1279 bits (645), Expect = 0.0
Identities = 662/665 (99%), Gaps = 2/665 (0%)
Strand = Plus / Plus
Query: 20 ttcgaggcaaggtggcgatcgtgaccgcttccacccagggaattggcttcagcatagctg 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ttcgaggcaaggtggcgatcgtgaccgcttccacccagggaattggcttcagcatagctg 64
Query: 80 agaggcttggcttggaaggtgcatctgttgtcatctcttctcgcaaacagcaaaatgttg 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 agaggcttggcttggaaggtgcatctgttgtcatctcttctcgcaaacagcaaaatgttg 124
Query: 140 atgcggctgcggaaaaactcagggctaaaggaattgatgtgttagcagttgtttgccatg 199
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 125 atgcggctgcggaaaaactcagggctaaaggaattgatgtgctagcagttgtt-gccatg 183
Query: 200 tttctaatgctcaacaaaggaagaatttgattgacaaaactgtgcagaagtatggcaaga 259
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tt-ctaatgctcaacaaaggaagaatttgattgacaaaactgtgcagaagtatggcaaga 242
Query: 260 tagatgttgttgtgtccaatgctgctgcgaatccttctgttgatgccattctgcaaacaa 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tagatgttgttgtgtccaatgctgctgcgaatccttctgttgatgccattctgcaaacaa 302
Query: 320 aggacacggttcttgacaagttatgggagataaatgtcaaagcctctatacttcttctca 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aggacacggttcttgacaagttatgggagataaatgtcaaagcctctatacttcttctca 362
Query: 380 aggatgcagctcctcacatgcagaaaggttcttctgtagttatcatttcctcaattgctg 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aggatgcagctcctcacatgcagaaaggttcttctgtagttatcatttcctcaattgctg 422
Query: 440 gttataacccaccacctgctatggctatgtatggagtaaccaaaacagcccttctaggac 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gttataacccaccacctgctatggctatgtatggagtaaccaaaacagcccttctaggac 482
Query: 500 ttaccaaagccctggctggtgagatggccccgaacactcgtgtaaactgtgttgctcctg 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ttaccaaagccctggctggtgagatggccccgaacactcgtgtaaactgtgttgctcctg 542
Query: 560 gttttgtgccaactaattttgcatcattcattaccagtaatgatgctatgagacaggaac 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gttttgtgccaactaattttgcatcattcattaccagtaatgatgctatgagacaggaac 602
Query: 620 ttgaagggaagacaatacttggaaggcttggcacaactgaagacatggctgctgctacag 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttgaagggaagacaatacttggaaggcttggcacaactgaagacatggctgctgctacag 662
Query: 680 ctttt 684
|||||
Sbjct: 663 ctttt 667
>gnl|LJGI|GO010191 similar to UniRef100_A7R0Z8 Cluster: Chromosome undetermined
scaffold_332, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_332,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (32%)
Length = 619
Score = 256 bits (129), Expect = 2e-67
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 1 atggaaataccgaaaaggtttcgaggcaaggtggcgatcgtgaccgcttccacccaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atggaaataccgaaaaggtttcgaggcaaggtggcgatcgtgaccgcttccacccaggga 159
Query: 61 attggcttcagcatagctgagaggcttggcttggaaggtgcatctgttgtcatctcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 attggcttcagcatagctgagaggcttggcttggaaggtgcatctgttgtcatctcttct 219
Query: 121 cgcaaacag 129
|||||||||
Sbjct: 220 cgcaaacag 228
Score = 230 bits (116), Expect = 9e-60
Identities = 119/120 (99%)
Strand = Plus / Plus
Query: 127 cagcaaaatgttgatgcggctgcggaaaaactcagggctaaaggaattgatgtgttagca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cagcaaaatgttgatgcggctgcggaaaaactcagggctaaaggaattgatgtgttagca 492
Query: 187 gttgtttgccatgtttctaatgctcaacaaaggaagaatttgattgacaaaactgtgcag 246
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 493 gttgtttgccatgtttctaatgctcaacaaaggaagaatttgactgacaaaactgtgcag 552
>gnl|LJGI|GO025907 similar to UniRef100_A7R0Z8 Cluster: Chromosome undetermined
scaffold_332, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_332,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (23%)
Length = 321
Score = 161 bits (81), Expect = 7e-39
Identities = 123/137 (89%)
Strand = Plus / Plus
Query: 40 gtgaccgcttccacccagggaattggcttcagcatagctgagaggcttggcttggaaggt 99
||||| ||||||||||||||||||||||| ||||| || |||||||| || ||||| |||
Sbjct: 142 gtgacagcttccacccagggaattggctttagcatcgccgagaggctaggtttggagggt 201
Query: 100 gcatctgttgtcatctcttctcgcaaacagcaaaatgttgatgcggctgcggaaaaactc 159
||||| |||||||||||||||||||||||||||||||| |||| |||||| || || ||
Sbjct: 202 gcatcagttgtcatctcttctcgcaaacagcaaaatgtcgatgaggctgcagagaagctg 261
Query: 160 agggctaaaggaattga 176
|||||||||||||||||
Sbjct: 262 agggctaaaggaattga 278
>gnl|LJGI|BP047644 similar to UniRef100_A7PCF5 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 431
Score = 151 bits (76), Expect = 7e-36
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 609 gagacaggaacttgaagggaagacaatacttggaaggcttggcacaactgaagacatggc 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gagacaggaacttgaagggaagacaatacttggaaggcttggcacaactgaagacatggc 292
Query: 669 tgctgctacagctttt 684
||||||||||||||||
Sbjct: 291 tgctgctacagctttt 276
>gnl|LJGI|FS328260 similar to UniRef100_Q1H445 Cluster: Transcriptional regulator,
TetR family; n=1; Methylobacillus flagellatus KT|Rep:
Transcriptional regulator, TetR family - Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875), partial
(7%)
Length = 501
Score = 67.9 bits (34), Expect = 8e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 80 agaggcttggcttggaaggtgcatctgttgtcatctcttctc 121
||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 414 agaggcttggcttagaaggtgtatctgttgtcatctcttctc 455
>gnl|LJGI|GO012595 similar to UniRef100_A7R0Z8 Cluster: Chromosome undetermined
scaffold_332, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_332,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (9%)
Length = 472
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 51 cacccagggaattggcttcagcatagctgagaggcttggcttggaaggtgcatctgttgt 110
||||||||||||| |||| |||| ||||||||||||||||||| ||| | |||||||
Sbjct: 136 cacccagggaatttgctttagcaatactgagaggcttggcttggagggtttacctgttgt 195
Query: 111 catctctt 118
||||||||
Sbjct: 196 catctctt 203
>gnl|LJGI|TC64446 similar to UniRef100_A6WBM5 Cluster: Transcriptional regulator,
TetR family; n=1; Kineococcus radiotolerans
SRS30216|Rep: Transcriptional regulator, TetR family -
Kineococcus radiotolerans SRS30216, partial (6%)
Length = 1103
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 126 acagcaaaatgttgatgcggctgcggaaaaactcagggct 165
||||||||||||||||| |||||| ||||| |||||||||
Sbjct: 389 acagcaaaatgttgatgtggctgctgaaaagctcagggct 428
>gnl|LJGI|TC68359 similar to UniRef100_Q0D4Y2 Cluster: Os07g0597300 protein; n=2;
Oryza sativa Japonica Group|Rep: Os07g0597300 protein -
Oryza sativa subsp. japonica (Rice), partial (9%)
Length = 1114
Score = 54.0 bits (27), Expect = 1e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 56 agggaattggcttcagcatagctgagaggcttggcttggaaggtgcatctgttgtcatct 115
|||||||| |||| |||| ||||||||||||||||||| ||| | ||||||||||||
Sbjct: 367 agggaatttgctttagcaatactgagaggcttggcttggagggtttacctgttgtcatct 426
Query: 116 ctt 118
|||
Sbjct: 427 ctt 429