Miyakogusa Predicted Gene

Lj2g3v2877220.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2877220.1 Non Chatacterized Hit- tr|I1KN18|I1KN18_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33148
PE,43,0.000000000000006,ZF_C3H1,Zinc finger, CCCH-type; zinc
finger,Zinc finger, CCCH-type; zf-CCCH,Zinc finger, CCCH-type;
,CUFF.39379.1
         (414 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69939 similar to UniRef100_A7PXA0 Cluster: Chromosome...   785   0.0  

>gnl|LJGI|TC69939 similar to UniRef100_A7PXA0 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 1057

 Score =  785 bits (396), Expect = 0.0
 Identities = 408/412 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccagaaaatcgacatgtttctaggaatgctgctgcttctaatccacctgctgacaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atgccagaaaatcgacatgtttctaggaatgctgctgcttctaatccacctgctgacaac 387

                                                                       
Query: 61  aacattgaagaagcaattcggcgtttgaaaatcaatggtaatcgggatagagatgctgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aacattgaagaagcaattcggcgtttgaaaatcaatggtaatcgggatagagatgctgtt 447

                                                                       
Query: 121 gctcaatctaccccgtatccggatcgacctggtgaacctgattgcttgtattatctgagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gctcaatctaccccgtatccggatcgacctggtgaacctgattgcttgtattatctgagg 507

                                                                       
Query: 181 actggaatgtgtggttatgggagcaattgtcgctataatcaccctactcatatttcactc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 actggaatgtgtggttatgggagcaattgtcgctataatcaccctactcatatttcactc 567

                                                                       
Query: 241 gctactcagttaggtgaagaactccctgagagagcggggcaacctgagggcgaatatttt 300
           ||||||||||||||||||||||||||||||||||| |||||||||||  |||| ||||||
Sbjct: 568 gctactcagttaggtgaagaactccctgagagagctgggcaacctgattgcgagtatttt 627

                                                                       
Query: 301 ctcaagacagggacgtgcaagtacgggtcaacatgtaaatatcatcatccaaaggacagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ctcaagacagggacgtgcaagtacgggtcaacatgtaaatatcatcatccaaaggacagg 687

                                                               
Query: 361 cgaggtgctgctccagtatcattcaatactttaggtcttcccatgcgtcagg 412
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 cgaggtgctgctccagtatcattcaatactttaggtcttcccatgcgtcagg 739