Miyakogusa Predicted Gene

Lj2g3v2877210.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2877210.1 Non Chatacterized Hit- tr|I1R036|I1R036_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,51.25,3e-18,no
description,NULL; seg,NULL; zf-CCCH,Zinc finger, CCCH-type; ZINC
FINGER CCCH DOMAIN-CONTAINING PR,CUFF.39378.1
         (789 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70274 similar to UniRef100_A7PXA0 Cluster: Chromosome...   753   0.0  
gnl|LJGI|TC69939 similar to UniRef100_A7PXA0 Cluster: Chromosome...   585   e-166

>gnl|LJGI|TC70274 similar to UniRef100_A7PXA0 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 742

 Score =  753 bits (380), Expect = 0.0
 Identities = 380/380 (100%)
 Strand = Plus / Plus

                                                                       
Query: 410 tcatgagcaccggaacctgcaaatatggatctgattgcaagttccaccatccaaaagaaa 469
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tcatgagcaccggaacctgcaaatatggatctgattgcaagttccaccatccaaaagaaa 60

                                                                       
Query: 470 gagtagcccaatcattgataaatccacttggccttcctgtgagacctgggcaggctatat 529
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gagtagcccaatcattgataaatccacttggccttcctgtgagacctgggcaggctatat 120

                                                                       
Query: 530 gctcctattacagaatctatggaatatgcaagtttggccccacatgcaaatttgatcatc 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctcctattacagaatctatggaatatgcaagtttggccccacatgcaaatttgatcatc 180

                                                                       
Query: 590 cagttgttgctatccctcagaactatggcatgacctcaccttctctatctgtacttgatg 649
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagttgttgctatccctcagaactatggcatgacctcaccttctctatctgtacttgatg 240

                                                                       
Query: 650 catcatctctcatgagtaatccaagagggttctcctccactgtccaactaactgagacat 709
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catcatctctcatgagtaatccaagagggttctcctccactgtccaactaactgagacat 300

                                                                       
Query: 710 ctccacctaaattatcaagtgacaagctacaacagaactcagacgctaaagctgaagctg 769
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctccacctaaattatcaagtgacaagctacaacagaactcagacgctaaagctgaagctg 360

                               
Query: 770 ctgcagaagaagattcaccc 789
           ||||||||||||||||||||
Sbjct: 361 ctgcagaagaagattcaccc 380


>gnl|LJGI|TC69939 similar to UniRef100_A7PXA0 Cluster: Chromosome chr12 scaffold_36,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_36, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (26%)
          Length = 1057

 Score =  585 bits (295), Expect = e-166
 Identities = 295/295 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgagaaccgggtcttgtaagtttggagctgcatgcaagtttcaccatccgcagcagcat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763  atgagaaccgggtcttgtaagtttggagctgcatgcaagtttcaccatccgcagcagcat 822

                                                                        
Query: 61   gcttcctttggcgcttactcattggctggatctcctacctcaactattattccagcatca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823  gcttcctttggcgcttactcattggctggatctcctacctcaactattattccagcatca 882

                                                                        
Query: 121  agtttaccatatgttggtgcatttcctgcatggtcagtaccaagaatgtcatatttatct 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883  agtttaccatatgttggtgcatttcctgcatggtcagtaccaagaatgtcatatttatct 942

                                                                        
Query: 181  ggacagggccttcaatcttatctgcctccttatctgtcttcttcgcaaggcattgtacct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943  ggacagggccttcaatcttatctgcctccttatctgtcttcttcgcaaggcattgtacct 1002

                                                                   
Query: 241  gcacagagctggaacacctacatgggaagtatgaaccctgcaatgcctagcagtt 295
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 gcacagagctggaacacctacatgggaagtatgaaccctgcaatgcctagcagtt 1057