Miyakogusa Predicted Gene

Lj2g3v2876160.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2876160.1 CUFF.39523.1
         (2616 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71711 weakly similar to UniRef100_A7P033 Cluster: Chr...   870   0.0  
gnl|LJGI|BP065703 similar to UniRef100_A7P033 Cluster: Chromosom...   626   e-178
gnl|LJGI|TC72281 weakly similar to UniRef100_A7PKF0 Cluster: Chr...    92   2e-17

>gnl|LJGI|TC71711 weakly similar to UniRef100_A7P033 Cluster: Chromosome chr6
           scaffold_3, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (7%)
          Length = 548

 Score =  870 bits (439), Expect = 0.0
 Identities = 439/439 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggaaaactcagagaacgatgaacctgacaagaagaggcctcatctcacctctgtttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atggaaaactcagagaacgatgaacctgacaagaagaggcctcatctcacctctgtttct 380

                                                                       
Query: 61  tcccgctcggccatgaacaaaactgctgatgcaggtgtcttacagttccagaatcagcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcccgctcggccatgaacaaaactgctgatgcaggtgtcttacagttccagaatcagcag 320

                                                                       
Query: 121 cttgttcaacagatagatgttcaaaaacatgctttgcaggaacttgaagacaaaattagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttgttcaacagatagatgttcaaaaacatgctttgcaggaacttgaagacaaaattagg 260

                                                                       
Query: 181 aaattaaaagaaaggcaaacttcttatgatgacttgttaattaaaacgaaccaacaatgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaattaaaagaaaggcaaacttcttatgatgacttgttaattaaaacgaaccaacaatgg 200

                                                                       
Query: 241 aatcagttggttgatgatatgactcttctggggatacgagctgggagaggcaaagagaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aatcagttggttgatgatatgactcttctggggatacgagctgggagaggcaaagagaca 140

                                                                       
Query: 301 ttgcaaactttgccgcaccttgataatcatcaaggtccacttccttcgtgtcctgcggag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ttgcaaactttgccgcaccttgataatcatcaaggtccacttccttcgtgtcctgcggag 80

                                                                       
Query: 361 gatatatttctatgtagattaatccagaaagattctattgaaggaagcagtaatagtgag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  gatatatttctatgtagattaatccagaaagattctattgaaggaagcagtaatagtgag 20

                              
Query: 421 ataatgaattatgttgagg 439
           |||||||||||||||||||
Sbjct: 19  ataatgaattatgttgagg 1


>gnl|LJGI|BP065703 similar to UniRef100_A7P033 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (6%)
          Length = 480

 Score =  626 bits (316), Expect = e-178
 Identities = 321/323 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2294 cttttgaaatggagttggatcgtgaaaggagttcacggaagaaacttcaagaagaattga 2353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480  cttttgaaatggagttggatcgtgaaaggagttcacggaagaaacttcaagaagaattga 421

                                                                        
Query: 2354 gggaattgaataaccaaattgctgagctgagttctgaaactggagaagctgcaatacaaa 2413
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420  gggaattgaataaccnaattgctgagctgagttctgaaactggagaagctgcaatacaaa 361

                                                                        
Query: 2414 aactcgaagaagaaataagagcttgcaagaacatgatcaagtgcactgtctgttctgatc 2473
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360  aactcgaagaagaaataagagcttgcaagaacatgatcaagtgcactgtctgttctgatc 301

                                                                        
Query: 2474 gtccaaaggaggttgtgattgtgaagtgctatcatctgttctgcaatccatgcatacaaa 2533
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300  gtcccaaggaggttgtgattgtgaagtgctatcatctgttctgcaatccatgcatacaaa 241

                                                                        
Query: 2534 gaaatcttgagctacgtcaccgtaaatgtcctgcctgcggagcagcatttggacagagtg 2593
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240  gaaatcttgagctacgtcaccgtaaatgtcctgcctgcggagcagcatttggacagagtg 181

                                   
Query: 2594 atgttcgctttgtcaaaatatga 2616
            |||||||||||||||||||||||
Sbjct: 180  atgttcgctttgtcaaaatatga 158


>gnl|LJGI|TC72281 weakly similar to UniRef100_A7PKF0 Cluster: Chromosome chr15
            scaffold_19, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr15 scaffold_19, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (37%)
          Length = 1344

 Score = 91.7 bits (46), Expect = 2e-17
 Identities = 91/106 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1880 tatctgaaattgagactattggtcaagcatatgaagatatgcagacacagaaccaacatc 1939
            |||| ||||| |||||||| || ||||| ||||| || ||||| || || ||||||||||
Sbjct: 356  tatccgaaatagagactataggacaagcctatgatgacatgcaaactcaaaaccaacatc 415

                                                          
Query: 1940 tgttgcagcaggtgactgagagggatgactataatataaagcttgt 1985
            |||| |||||| | |||||||||||||| |||||||| ||||||||
Sbjct: 416  tgttacagcagattactgagagggatgattataatattaagcttgt 461