Miyakogusa Predicted Gene
- Lj2g3v2876160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2876160.1 CUFF.39523.1
(2616 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71711 weakly similar to UniRef100_A7P033 Cluster: Chr... 870 0.0
gnl|LJGI|BP065703 similar to UniRef100_A7P033 Cluster: Chromosom... 626 e-178
gnl|LJGI|TC72281 weakly similar to UniRef100_A7PKF0 Cluster: Chr... 92 2e-17
>gnl|LJGI|TC71711 weakly similar to UniRef100_A7P033 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 548
Score = 870 bits (439), Expect = 0.0
Identities = 439/439 (100%)
Strand = Plus / Minus
Query: 1 atggaaaactcagagaacgatgaacctgacaagaagaggcctcatctcacctctgtttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atggaaaactcagagaacgatgaacctgacaagaagaggcctcatctcacctctgtttct 380
Query: 61 tcccgctcggccatgaacaaaactgctgatgcaggtgtcttacagttccagaatcagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcccgctcggccatgaacaaaactgctgatgcaggtgtcttacagttccagaatcagcag 320
Query: 121 cttgttcaacagatagatgttcaaaaacatgctttgcaggaacttgaagacaaaattagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttgttcaacagatagatgttcaaaaacatgctttgcaggaacttgaagacaaaattagg 260
Query: 181 aaattaaaagaaaggcaaacttcttatgatgacttgttaattaaaacgaaccaacaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaattaaaagaaaggcaaacttcttatgatgacttgttaattaaaacgaaccaacaatgg 200
Query: 241 aatcagttggttgatgatatgactcttctggggatacgagctgggagaggcaaagagaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aatcagttggttgatgatatgactcttctggggatacgagctgggagaggcaaagagaca 140
Query: 301 ttgcaaactttgccgcaccttgataatcatcaaggtccacttccttcgtgtcctgcggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ttgcaaactttgccgcaccttgataatcatcaaggtccacttccttcgtgtcctgcggag 80
Query: 361 gatatatttctatgtagattaatccagaaagattctattgaaggaagcagtaatagtgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 gatatatttctatgtagattaatccagaaagattctattgaaggaagcagtaatagtgag 20
Query: 421 ataatgaattatgttgagg 439
|||||||||||||||||||
Sbjct: 19 ataatgaattatgttgagg 1
>gnl|LJGI|BP065703 similar to UniRef100_A7P033 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 480
Score = 626 bits (316), Expect = e-178
Identities = 321/323 (99%)
Strand = Plus / Minus
Query: 2294 cttttgaaatggagttggatcgtgaaaggagttcacggaagaaacttcaagaagaattga 2353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cttttgaaatggagttggatcgtgaaaggagttcacggaagaaacttcaagaagaattga 421
Query: 2354 gggaattgaataaccaaattgctgagctgagttctgaaactggagaagctgcaatacaaa 2413
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gggaattgaataaccnaattgctgagctgagttctgaaactggagaagctgcaatacaaa 361
Query: 2414 aactcgaagaagaaataagagcttgcaagaacatgatcaagtgcactgtctgttctgatc 2473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aactcgaagaagaaataagagcttgcaagaacatgatcaagtgcactgtctgttctgatc 301
Query: 2474 gtccaaaggaggttgtgattgtgaagtgctatcatctgttctgcaatccatgcatacaaa 2533
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtcccaaggaggttgtgattgtgaagtgctatcatctgttctgcaatccatgcatacaaa 241
Query: 2534 gaaatcttgagctacgtcaccgtaaatgtcctgcctgcggagcagcatttggacagagtg 2593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaaatcttgagctacgtcaccgtaaatgtcctgcctgcggagcagcatttggacagagtg 181
Query: 2594 atgttcgctttgtcaaaatatga 2616
|||||||||||||||||||||||
Sbjct: 180 atgttcgctttgtcaaaatatga 158
>gnl|LJGI|TC72281 weakly similar to UniRef100_A7PKF0 Cluster: Chromosome chr15
scaffold_19, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_19, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (37%)
Length = 1344
Score = 91.7 bits (46), Expect = 2e-17
Identities = 91/106 (85%)
Strand = Plus / Plus
Query: 1880 tatctgaaattgagactattggtcaagcatatgaagatatgcagacacagaaccaacatc 1939
|||| ||||| |||||||| || ||||| ||||| || ||||| || || ||||||||||
Sbjct: 356 tatccgaaatagagactataggacaagcctatgatgacatgcaaactcaaaaccaacatc 415
Query: 1940 tgttgcagcaggtgactgagagggatgactataatataaagcttgt 1985
|||| |||||| | |||||||||||||| |||||||| ||||||||
Sbjct: 416 tgttacagcagattactgagagggatgattataatattaagcttgt 461