Miyakogusa Predicted Gene

Lj2g3v2843700.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2843700.2 Non Chatacterized Hit- tr|I1JY97|I1JY97_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,84.62,0,FAMILY
NOT NAMED,NULL; LOB,Lateral organ boundaries, LOB; DUF260,Lateral
organ boundaries, LOB; coil,CUFF.39339.2
         (489 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58638 similar to UniRef100_A7NY32 Cluster: Chromosome...   161   5e-39

>gnl|LJGI|TC58638 similar to UniRef100_A7NY32 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (77%)
          Length = 922

 Score =  161 bits (81), Expect = 5e-39
 Identities = 219/265 (82%)
 Strand = Plus / Plus

                                                                       
Query: 38  ccccttgtgctgcttgtaagctcttgagaagaaggtgtgcccaagaatgccccttttctc 97
           ||||||||||||| || |||||  ||||||||||||||||  |||||||||| || || |
Sbjct: 178 ccccttgtgctgcatgcaagcttctgagaagaaggtgtgctgaagaatgccctttctccc 237

                                                                       
Query: 98  catatttctctccccacgagccccacaagtttgcttcagtccacaaagtctttggtgcca 157
           | |||||||| || || |||||||| ||||||||  | || |||||||| |||||||| |
Sbjct: 238 cttatttctcacctcatgagccccagaagtttgcagctgttcacaaagtgtttggtgcaa 297

                                                                       
Query: 158 gcaacgtctccaaaatgctaatggaggtacccgagagtcaaagagctgatgctgcaaata 217
           |||| || ||||| ||||||||||||||||| ||  | |||||||||||||| |||||||
Sbjct: 298 gcaatgtttccaagatgctaatggaggtacctgaagggcaaagagctgatgcagcaaata 357

                                                                       
Query: 218 gtctagtttatgaggctaatgaaaggctaagagacccagtttatggaagcatgggtgcaa 277
           |  | |||||||| || ||    ||| | ||||| ||||| |||||| ||||||||||||
Sbjct: 358 gcatggtttatgaagcaaacttgaggttgagagatccagtgtatggatgcatgggtgcaa 417

                                    
Query: 278 tttcttctttgcaacagcaagttca 302
           ||||  ||||||| || ||||||||
Sbjct: 418 tttcagctttgcagcaacaagttca 442