Miyakogusa Predicted Gene
- Lj2g3v2843030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2843030.1 tr|Q5BN91|Q5BN91_ACEAT Sorting nexin 1
OS=Acetabularia acetabulum PE=2 SV=1,24.29,5e-18,seg,NULL;
coiled-coil,NULL; PhoX homologous domain, present in p47phox a,Phox
homologous domain; no ,CUFF.39320.1
(1275 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60842 similar to UniRef100_A7Q3Q2 Cluster: Chromosome... 1130 0.0
gnl|LJGI|TC65395 similar to UniRef100_A7Q3Q2 Cluster: Chromosome... 781 0.0
gnl|LJGI|TC60555 similar to UniRef100_A7NY69 Cluster: Chromosome... 58 1e-07
>gnl|LJGI|TC60842 similar to UniRef100_A7Q3Q2 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 757
Score = 1130 bits (570), Expect = 0.0
Identities = 570/570 (100%)
Strand = Plus / Plus
Query: 706 cttactaaatttgaaacagaagaagccatgttcgattctcagcaagtacgggctgctgac 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttactaaatttgaaacagaagaagccatgttcgattctcagcaagtacgggctgctgac 60
Query: 766 atgagaaatgtggcgaccgcagctgttaaagcaagcaggttatatagagagctgaataca 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgagaaatgtggcgaccgcagctgttaaagcaagcaggttatatagagagctgaataca 120
Query: 826 caaacaatcaaacatttggataaactacatgaatacctaggaacaatgctagcagtcaac 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaacaatcaaacatttggataaactacatgaatacctaggaacaatgctagcagtcaac 180
Query: 886 aatgcattttctgatcgatcaagtgcattgttgacagttcaaacactctcaacagaacta 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgcattttctgatcgatcaagtgcattgttgacagttcaaacactctcaacagaacta 240
Query: 946 gcttctttacattcacggattgagaagcttgaacttgcttcatccaaaatatttggtgga 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcttctttacattcacggattgagaagcttgaacttgcttcatccaaaatatttggtgga 300
Query: 1006 gacaagactaggctgcggaaaattgatgagttgaaagaggctgttagagttactgagaat 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacaagactaggctgcggaaaattgatgagttgaaagaggctgttagagttactgagaat 360
Query: 1066 gctaaagtttgtgcagataaagagtatgaacgaatcaaggaaaacaataggagtgagctt 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctaaagtttgtgcagataaagagtatgaacgaatcaaggaaaacaataggagtgagctt 420
Query: 1126 gaaagaattgacagggagaggcataacgactttcaaaacatgctgcgagggtttgttgtc 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaagaattgacagggagaggcataacgactttcaaaacatgctgcgagggtttgttgtc 480
Query: 1186 aatcaagcaggttatgcagagaagatggctgctgtgtgggagaagctagctgaagaaaca 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatcaagcaggttatgcagagaagatggctgctgtgtgggagaagctagctgaagaaaca 540
Query: 1246 gctacatactcaagagacagcagctaaaac 1275
||||||||||||||||||||||||||||||
Sbjct: 541 gctacatactcaagagacagcagctaaaac 570
>gnl|LJGI|TC65395 similar to UniRef100_A7Q3Q2 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 1231
Score = 781 bits (394), Expect = 0.0
Identities = 394/394 (100%)
Strand = Plus / Plus
Query: 99 ggcaatcttcacctcgttcgatggcaacggccacgacgcgacaacccacgaacccaccac 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ggcaatcttcacctcgttcgatggcaacggccacgacgcgacaacccacgaacccaccac 454
Query: 159 ccaatccggctccgattacctccacatctcggtctccgacccacaagaggagcaggatct 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ccaatccggctccgattacctccacatctcggtctccgacccacaagaggagcaggatct 514
Query: 219 cacgaactccctcgtcggcgggaataccttccagacgtatcttatcaccacgagaaccaa 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cacgaactccctcgtcggcgggaataccttccagacgtatcttatcaccacgagaaccaa 574
Query: 279 cgtgccggagttgggaggacccgggtccgagtacagcgtccggaggaggttccgggaggt 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cgtgccggagttgggaggacccgggtccgagtacagcgtccggaggaggttccgggaggt 634
Query: 339 tgtgacgctgtcggagaggttgtcggaggcgtacagggggtatgtgattccggtgaggcc 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tgtgacgctgtcggagaggttgtcggaggcgtacagggggtatgtgattccggtgaggcc 694
Query: 399 ggagaagagtactgtggagaggcaggtgatgcagaagggggagtttgtggagcagaggag 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ggagaagagtactgtggagaggcaggtgatgcagaagggggagtttgtggagcagaggag 754
Query: 459 agtggcgttggagaagtatttgaggaagctcggg 492
||||||||||||||||||||||||||||||||||
Sbjct: 755 agtggcgttggagaagtatttgaggaagctcggg 788
Score = 287 bits (145), Expect = 8e-77
Identities = 148/149 (99%)
Strand = Plus / Plus
Query: 486 gctcgggattttcaaggagttgaagcagtctgttaccaatgattggggtgctgccaagcc 545
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 gctcaggattttcaaggagttgaagcagtctgttaccaatgattggggtgctgccaagcc 1048
Query: 546 tttggttgttgaggaagacaaggagtttatggagaagaagaacagcttgaatgagtttga 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 tttggttgttgaggaagacaaggagtttatggagaagaagaacagcttgaatgagtttga 1108
Query: 606 gcaaaacctcagcaatgtttctcagcagg 634
|||||||||||||||||||||||||||||
Sbjct: 1109 gcaaaacctcagcaatgtttctcagcagg 1137
Score = 194 bits (98), Expect = 9e-49
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 atgatcctcttcacgcttcccaagacgacggaatggagtcacttgccctcaacgacgacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atgatcctcttcacgcttcccaagacgacggaatggagtcacttgccctcaacgacgacg 306
Query: 61 gaaactcctcctcctccggccacctccaacagccgctc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaaactcctcctcctccggccacctccaacagccgctc 344
>gnl|LJGI|TC60555 similar to UniRef100_A7NY69 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (34%)
Length = 800
Score = 58.0 bits (29), Expect = 1e-07
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1099 atcaaggaaaacaataggagtgagcttgaaaga 1131
||||||||||||||||||||||| |||||||||
Sbjct: 436 atcaaggaaaacaataggagtgaacttgaaaga 468