Miyakogusa Predicted Gene

Lj2g3v2827810.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2827810.1 CUFF.39323.1
         (1617 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AW719523 similar to UniRef100_Q0WRR0 Cluster: ATP-depen...  1049   0.0  

>gnl|LJGI|AW719523 similar to UniRef100_Q0WRR0 Cluster: ATP-dependent RNA helicase-like
            protein; n=1; Arabidopsis thaliana|Rep: ATP-dependent RNA
            helicase-like protein - Arabidopsis thaliana (Mouse-ear
            cress), partial (31%)
          Length = 529

 Score = 1049 bits (529), Expect = 0.0
 Identities = 529/529 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1079 aagatccaaatgttttcatacatagagttggtcgaacagctcggctgggtaaacaaggtc 1138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aagatccaaatgttttcatacatagagttggtcgaacagctcggctgggtaaacaaggtc 60

                                                                        
Query: 1139 atgctgttgtcttcttattaccaaaggaggattcttacgtagaattccttcgtatacgaa 1198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atgctgttgtcttcttattaccaaaggaggattcttacgtagaattccttcgtatacgaa 120

                                                                        
Query: 1199 gagttcctcttcaagagattagatgctctgatgatgcgcctgatgttgttcctcagattc 1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gagttcctcttcaagagattagatgctctgatgatgcgcctgatgttgttcctcagattc 180

                                                                        
Query: 1259 gttctgctgcaaaaaaggatcgtgatatcatggagaagggtgttaaagcatttgtttctt 1318
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gttctgctgcaaaaaaggatcgtgatatcatggagaagggtgttaaagcatttgtttctt 240

                                                                        
Query: 1319 acatccgtgcttataaagagcatcactgctcttatatttttaggtggagagaacttgaaa 1378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  acatccgtgcttataaagagcatcactgctcttatatttttaggtggagagaacttgaaa 300

                                                                        
Query: 1379 ttgggaaattggctatgggacatggtttactgagacttcctttagtgccagaggtaaaac 1438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ttgggaaattggctatgggacatggtttactgagacttcctttagtgccagaggtaaaac 360

                                                                        
Query: 1439 aaaactctctttccaccaagggatttgaaccagttgaagatatcaattttgaggacatta 1498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  aaaactctctttccaccaagggatttgaaccagttgaagatatcaattttgaggacatta 420

                                                                        
Query: 1499 agtacagggataaatcgagagagaaacaacggaagaagaacctgcaagtaaagaaggaag 1558
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  agtacagggataaatcgagagagaaacaacggaagaagaacctgcaagtaaagaaggaag 480

                                                             
Query: 1559 ctaaggagaaagagccaagacctaaaaaactaagcaaaaccccaaatgc 1607
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  ctaaggagaaagagccaagacctaaaaaactaagcaaaaccccaaatgc 529