Miyakogusa Predicted Gene

Lj2g3v2794500.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2794500.1 Non Chatacterized Hit- tr|Q8LJN2|Q8LJN2_ORYSJ
Putative uncharacterized protein B1189A09.37 OS=Oryza
,41.43,2e-19,seg,NULL; Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin,CUFF.39285.1
         (537 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65992 weakly similar to UniRef100_A7Q3M0 Cluster: Chr...  1065   0.0  

>gnl|LJGI|TC65992 weakly similar to UniRef100_A7Q3M0 Cluster: Chromosome chr13
           scaffold_48, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (75%)
          Length = 833

 Score = 1065 bits (537), Expect = 0.0
 Identities = 537/537 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctagcaagaacttcatcaccctctcaaccttcctccttcttcaggttatcttcttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54  atggctagcaagaacttcatcaccctctcaaccttcctccttcttcaggttatcttcttc 113

                                                                       
Query: 61  ccctgcatagcagccactgaaaatgctccaaaagcaatagagaagaaagtggatgtggtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ccctgcatagcagccactgaaaatgctccaaaagcaatagagaagaaagtggatgtggtg 173

                                                                       
Query: 121 gtggaaaccacagtctactgccagagttgtgagcactatggaacatggtctttgactgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 gtggaaaccacagtctactgccagagttgtgagcactatggaacatggtctttgactgga 233

                                                                       
Query: 181 gcgaagccaattccttcagctaaagtaagtgttacctgcaaaaaccacaaaggtaaactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gcgaagccaattccttcagctaaagtaagtgttacctgcaaaaaccacaaaggtaaactt 293

                                                                       
Query: 241 gtttactataaggtctttgagtcagacaaaaatggctacttatatgctcaacttgaagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gtttactataaggtctttgagtcagacaaaaatggctacttatatgctcaacttgaagag 353

                                                                       
Query: 301 ttcaagatgcagcactctttactagaccatcctcttcactcttgctatgtaaagcctgtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ttcaagatgcagcactctttactagaccatcctcttcactcttgctatgtaaagcctgtt 413

                                                                       
Query: 361 tggtcccctcttgaaagttgcaaccttctttctaatgtcaaccattctcttgatggagct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tggtcccctcttgaaagttgcaaccttctttctaatgtcaaccattctcttgatggagct 473

                                                                       
Query: 421 agacttcgttaccagaacaagagattgcgtggaagtaattatgaagctgttgtttactct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 agacttcgttaccagaacaagagattgcgtggaagtaattatgaagctgttgtttactct 533

                                                                    
Query: 481 gctagtcccttggcttttcgccgatccgattgttcacacactgcacctcacaattaa 537
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gctagtcccttggcttttcgccgatccgattgttcacacactgcacctcacaattaa 590