Miyakogusa Predicted Gene

Lj2g3v2794440.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2794440.1 tr|E4NKF8|E4NKF8_MEDTR E3 ubiquitin ligase
OS=Medicago truncatula GN=PUB1 PE=2 SV=1,79.8,0,Modified RING finger
domain,U box domain; Armadillo/beta-catenin-like repeats,Armadillo;
seg,NULL; A,CUFF.39278.1
         (2065 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71173 similar to UniRef100_A7Q3L5 Cluster: Chromosome...   523   e-147

>gnl|LJGI|TC71173 similar to UniRef100_A7Q3L5 Cluster: Chromosome chr13 scaffold_48,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_48, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 580

 Score =  523 bits (264), Expect = e-147
 Identities = 264/264 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1802 gggataatagagctttggtgccacttcttattgatcttttgagatttgggtcagtgaaag 1861
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    gggataatagagctttggtgccacttcttattgatcttttgagatttgggtcagtgaaag 61

                                                                        
Query: 1862 ggaaggagaactcaataactcttctgcttgggttgtgcaaggaagaaggggagctagtgg 1921
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   ggaaggagaactcaataactcttctgcttgggttgtgcaaggaagaaggggagctagtgg 121

                                                                        
Query: 1922 cgaggcgtctgttggcgaatccaaggagtgttccttctcttcagagcttggctgctgatg 1981
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  cgaggcgtctgttggcgaatccaaggagtgttccttctcttcagagcttggctgctgatg 181

                                                                        
Query: 1982 gttctttgagagctaggagaaaagcagatgccctgcttcggttgctcaataggtgctgct 2041
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  gttctttgagagctaggagaaaagcagatgccctgcttcggttgctcaataggtgctgct 241

                                    
Query: 2042 ctcaacctcatcattctgtgtgag 2065
            ||||||||||||||||||||||||
Sbjct: 242  ctcaacctcatcattctgtgtgag 265