Miyakogusa Predicted Gene
- Lj2g3v2771110.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2771110.1 Non Chatacterized Hit- tr|I1JIA0|I1JIA0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,96.66,0,seg,NULL;
CLATHRIN HEAVY CHAIN,NULL; no description,Clathrin, heavy chain,
linker/propeller domain; ,CUFF.39304.1
(2622 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58548 homologue to UniRef100_Q39834 Cluster: Clathrin... 1635 0.0
gnl|LJGI|TC57991 1403 0.0
gnl|LJGI|BP066698 homologue to UniRef100_Q39834 Cluster: Clathri... 82 2e-14
>gnl|LJGI|TC58548 homologue to UniRef100_Q39834 Cluster: Clathrin heavy chain; n=1;
Glycine max|Rep: Clathrin heavy chain - Glycine max
(Soybean), partial (16%)
Length = 825
Score = 1635 bits (825), Expect = 0.0
Identities = 825/825 (100%)
Strand = Plus / Plus
Query: 1388 aaaattggttggcagaggacaagcttgaatgcagcgaggagctaggagatctcgttaaga 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaattggttggcagaggacaagcttgaatgcagcgaggagctaggagatctcgttaaga 60
Query: 1448 ctgtggataacgatcttgctttaaaaatttatatcaaagccagagctactccaaaagttg 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtggataacgatcttgctttaaaaatttatatcaaagccagagctactccaaaagttg 120
Query: 1508 ttgcagcttttgctgagaggagggagtttgacaaaattctgatatactctaagcaggttg 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgcagcttttgctgagaggagggagtttgacaaaattctgatatactctaagcaggttg 180
Query: 1568 ggtacacacctgactacctcttcctcttgcaaacaattctccggacagatcctcagggtg 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtacacacctgactacctcttcctcttgcaaacaattctccggacagatcctcagggtg 240
Query: 1628 ctgttaattttgcgttaatgatgtctcaaatggagggaggtagcccagttgattacaata 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgttaattttgcgttaatgatgtctcaaatggagggaggtagcccagttgattacaata 300
Query: 1688 ccataactgatctgtttcttcagagaaacctgatccgtgaggcaacagcttttcttctgg 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccataactgatctgtttcttcagagaaacctgatccgtgaggcaacagcttttcttctgg 360
Query: 1748 atgttttaaagccaaatctaccagaacacgggttcctgcagacaaaggtcttggagataa 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgttttaaagccaaatctaccagaacacgggttcctgcagacaaaggtcttggagataa 420
Query: 1808 atctggtgacattccccaatgttgctgatgctattttggctaatggcatgttcagccatt 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atctggtgacattccccaatgttgctgatgctattttggctaatggcatgttcagccatt 480
Query: 1868 atgaccgtcctcgtattgcccaactctgtgaaaaagctggtctttacgtgcgagctttgc 1927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgaccgtcctcgtattgcccaactctgtgaaaaagctggtctttacgtgcgagctttgc 540
Query: 1928 aacattacacagagctaccagatataaaacgtgtgattgttaatacacatgcaattgagc 1987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacattacacagagctaccagatataaaacgtgtgattgttaatacacatgcaattgagc 600
Query: 1988 ctcagtcacttgtagagttttttggcactctatctcaagaatgggctttagagtgcatga 2047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctcagtcacttgtagagttttttggcactctatctcaagaatgggctttagagtgcatga 660
Query: 2048 aagacctattgctggccaaccttaggggaaacctgcagattattgtgcaggttgctaaag 2107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagacctattgctggccaaccttaggggaaacctgcagattattgtgcaggttgctaaag 720
Query: 2108 aatactgtgaacaattgggcgttgatgcctgcataaaactttttgagcagtttaggtcat 2167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aatactgtgaacaattgggcgttgatgcctgcataaaactttttgagcagtttaggtcat 780
Query: 2168 atgaaggactgtactttttccttggctcatatttgagctccagtg 2212
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atgaaggactgtactttttccttggctcatatttgagctccagtg 825
>gnl|LJGI|TC57991
Length = 850
Score = 1403 bits (708), Expect = 0.0
Identities = 708/708 (100%)
Strand = Plus / Plus
Query: 1 atggcggccgccgcgaacgctccgatcgccatgaaagaagtcctcaccttgccgaccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atggcggccgccgcgaacgctccgatcgccatgaaagaagtcctcaccttgccgaccctc 202
Query: 61 ggcatcaatacacaattcatcaatttcacgcatgtgacgatggaatcggacaagtatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggcatcaatacacaattcatcaatttcacgcatgtgacgatggaatcggacaagtatatc 262
Query: 121 tgtgttcgagaaacggcgccgcagagcagcgtggttatcgttgatatgagcatgccaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgtgttcgagaaacggcgccgcagagcagcgtggttatcgttgatatgagcatgccaaat 322
Query: 181 caacctttaaggaggcctattactgcggattcggctcttatgaatccgaattcgagaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caacctttaaggaggcctattactgcggattcggctcttatgaatccgaattcgagaatc 382
Query: 241 cttgctttgaaagcgcaactccaagggactactcaggatcacctgcagatatttaatatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cttgctttgaaagcgcaactccaagggactactcaggatcacctgcagatatttaatatt 442
Query: 301 gaattgaaagctaagatgaaatcatatcagatgcctgagcaggtagtcttctggaagtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaattgaaagctaagatgaaatcatatcagatgcctgagcaggtagtcttctggaagtgg 502
Query: 361 attagccccaagacattgggccttgtaacactgacctctgtataccattggtcaattgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 attagccccaagacattgggccttgtaacactgacctctgtataccattggtcaattgaa 562
Query: 421 ggtgactctgaacctattaagatgtttgagagaactgcgaatttggcgaacaaccagata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggtgactctgaacctattaagatgtttgagagaactgcgaatttggcgaacaaccagata 622
Query: 481 attaattatcgatctgaccctacagaaaaatggttggtcttgattggtattgctcctggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 attaattatcgatctgaccctacagaaaaatggttggtcttgattggtattgctcctggt 682
Query: 541 tcccctgagaggccgcaattggttaaaggaaacatgcaacttttctctgtggatcagcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tcccctgagaggccgcaattggttaaaggaaacatgcaacttttctctgtggatcagcag 742
Query: 601 cgcagtcaggctcttgaagctcatgctgcatcatttgcccaatataaagttcctgggaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cgcagtcaggctcttgaagctcatgctgcatcatttgcccaatataaagttcctgggaat 802
Query: 661 gaaaatccttctactttgatttctttttccacaaagacacttaatgct 708
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gaaaatccttctactttgatttctttttccacaaagacacttaatgct 850
>gnl|LJGI|BP066698 homologue to UniRef100_Q39834 Cluster: Clathrin heavy chain; n=1;
Glycine max|Rep: Clathrin heavy chain - Glycine max
(Soybean), partial (9%)
Length = 442
Score = 81.8 bits (41), Expect = 2e-14
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 2533 aaaggtttgattctttctgtccgttcattactgccagtggagccccttgtggaggaatgt 2592
||||| |||||||| ||||| |||||||| ||||| |||||||| || ||||||||||||
Sbjct: 1 aaaggcttgattctctctgttcgttcattgctgccggtggagccactggtggaggaatgt 60
Query: 2593 gagaagagg 2601
|||||||||
Sbjct: 61 gagaagagg 69