Miyakogusa Predicted Gene

Lj2g3v2748740.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2748740.1 Non Chatacterized Hit- tr|C5YZD3|C5YZD3_SORBI
Putative uncharacterized protein Sb09g022940 OS=Sorghu,48.84,1e-18,GB
DEF: HYPOTHETICAL PROTEIN F27K19_140 (HYPOTHETICAL PROTEIN
AT3G55960),NULL; NUCLEAR LIM INTERACTO,CUFF.39238.1
         (456 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67960 similar to UniRef100_A7Q3I0 Cluster: Chromosome...   452   e-127
gnl|LJGI|TC59077 similar to UniRef100_A7Q3I0 Cluster: Chromosome...   100   1e-20
gnl|LJGI|GO016551 similar to UniRef100_A7Q3I0 Cluster: Chromosom...    80   1e-14

>gnl|LJGI|TC67960 similar to UniRef100_A7Q3I0 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 754

 Score =  452 bits (228), Expect = e-127
 Identities = 228/228 (100%)
 Strand = Plus / Plus

                                                                       
Query: 203 agcccctaccctcagttgagcttcaggaacacgattcgccaccaccctccgcccttgaaa 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agcccctaccctcagttgagcttcaggaacacgattcgccaccaccctccgcccttgaaa 430

                                                                       
Query: 263 tcaccgccgtcgatcaccaccctacccaaaaactcacggtagtgcttgacttggatgaaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcaccgccgtcgatcaccaccctacccaaaaactcacggtagtgcttgacttggatgaaa 490

                                                                       
Query: 323 cactggtatgtgcgtatgagacatcaagcctgccagcttcactacgtgctcaagcaattg 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cactggtatgtgcgtatgagacatcaagcctgccagcttcactacgtgctcaagcaattg 550

                                                           
Query: 383 agggtggtttgaattggtttgatctggaatgtgtatcttcagataagg 430
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 agggtggtttgaattggtttgatctggaatgtgtatcttcagataagg 598



 Score =  262 bits (132), Expect = 2e-69
 Identities = 132/132 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcgagttgactcaggccgaggtgtactcgccgaggactcagcaagtgtggagggca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 atgggcgagttgactcaggccgaggtgtactcgccgaggactcagcaagtgtggagggca 228

                                                                       
Query: 61  ctgttgagctggttggccttcttcttccagatcttctttcagattatcagagcccttggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ctgttgagctggttggccttcttcttccagatcttctttcagattatcagagcccttggt 288

                       
Query: 121 cactaccctttg 132
           ||||||||||||
Sbjct: 289 cactaccctttg 300


>gnl|LJGI|TC59077 similar to UniRef100_A7Q3I0 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (68%)
          Length = 1095

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 107/126 (84%)
 Strand = Plus / Plus

                                                                       
Query: 289 caaaaactcacggtagtgcttgacttggatgaaacactggtatgtgcgtatgagacatca 348
           |||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 263 caaaaactcacggtggtgctggacttggatgaaactctggtatgtgcatatgagacatca 322

                                                                       
Query: 349 agcctgccagcttcactacgtgctcaagcaattgagggtggtttgaattggtttgatctg 408
           ||  | |||||| | || ||  |||| |||||| | | |||||| |||||||||||  ||
Sbjct: 323 agtgtaccagctacgcttcgcactcaggcaattcaagctggtttaaattggtttgagatg 382

                 
Query: 409 gaatgt 414
           ||||||
Sbjct: 383 gaatgt 388



 Score = 58.0 bits (29), Expect = 5e-08
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                       
Query: 40  actcagcaagtgtggagggcactgttgagctggttggccttcttcttccagatcttcttt 99
           ||||||||||  |||||||| || ||||||||||| |  ||||||||||| ||||||| |
Sbjct: 59  actcagcaagcatggagggcgctcttgagctggttcggtttcttcttccaaatcttctat 118

                                            
Query: 100 cagattatcagagcccttggtcactaccctttg 132
           ||||| ||  ||| | | | |||||||||||||
Sbjct: 119 cagatcattggagtcttcgctcactaccctttg 151


>gnl|LJGI|GO016551 similar to UniRef100_A7Q3I0 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (64%)
          Length = 817

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 100/120 (83%)
 Strand = Plus / Minus

                                                                       
Query: 295 ctcacggtagtgcttgacttggatgaaacactggtatgtgcgtatgagacatcaagcctg 354
           |||||||| ||||| |||||| ||||||| ||||||||||| ||||||||||||||  | 
Sbjct: 817 ctcacggtggtgctggacttgaatgaaactctggtatgtgcatatgagacatcaagtgta 758

                                                                       
Query: 355 ccagcttcactacgtgctcaagcaattgagggtggtttgaattggtttgatctggaatgt 414
           |||||| | || ||  |||| |||||| | | |||||| |||||||||||  ||||||||
Sbjct: 757 ccagctacgcttcgcactcaggcaattcaagctggtttaaattggtttgagatggaatgt 698